Template-based Modeling Results for YJGM_ECOLI

Submitted Primary Sequence

>Length 167
MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLREL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLREL
CCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEEEEEEECCCCCCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLREL
54421232010020223002100300220022112213321212131012003111332100000112110000000011222432001001000022022310021002000210342212100010022133002002401112022111112111010101134
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLREL
1	MUSTER	3lodA	0.243	0.862	2.395	threading_1	-----NAMYTITDIAPTD-AEFIALIAALDAWQETLDLSQLP-------------PQTVIALAIRSPQGEAVGCGAIVLS---EEGFGEMKRVYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRC-AFAPYQPDPLSVFMEKPL
2	SPARKS	3loda	0.243	0.862	2.419	threading_2	-----NAMYTITDIAPTD-AEFIALIAALDAWQETLDLSQLP-------------PQTVIALAIRSPQGEAVGCGAIVLS---EEGFGEMKRVYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRC-AFAPYQPDPLSVFMEKPL
3	PROSPECT2	2q7bA	0.159	0.940	2.623	threading_3	F----QGEIKEYENNPYHLAQLVDLINYCQNI---EAKLDIKAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLRI---DDKTAVLKKFFTYPKYRGNPVRGRKLFERFLFARASKFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDVDYIFPSRIYVKLL
4	PPA-I	3lodA	0.243	0.862	2.459	threading_4	-----NAMYTITDIAPTD-AEFIALIAALDAWQETLDLSQLP-------------PQTVIALAIRSPQGEAVGCGAIVLS---EEGFGEMKRVYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRC-AFAPYQPDPLSVFMEKPL
5	HHPRED-l	1yr0_A	0.168	0.928	1.563	threading_5	-------SVELRDATVDDLSGI-EIYNDAVVNTTAIWNEVVVDLENRKDWFAA-RTSRGFPVIVAILDGKVAGYASYGDWRAFDYRHTREHSVYVHKDARGHGIGKRL-QALIDHAGGNDVHVLIAAIEAENTASIRLHESLGFRVVGRFSEVFGRWLDLTC-ELK-
6	HHPRED-g	1yx0_A	0.221	0.892	1.712	threading_6	------MHIKIDD---LTGRQVVSLVNEHLHSMTLMSPPE-SIHALGLEKL----RGPEITFWSAWEGDELAGCGALKEL---DTRHGEIKSMRTSASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGASFEPARKLYESFGFQYCE-PFADYGEDPNSVFMTKKL
7	SP3	3loda	0.268	0.850	2.511	threading_7	M-------YTITDIAPTD-AEFIALIAALDAWQ----------ETLDLSQLP---PQTVIALAIRSPQGEAVGCGAIVLS---EEGFGEMKRVYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQTRC-AFAPYQPDPLSVFMEKPL
8	SAM-T99	1yx0A	0.216	0.886	2.268	threading_8	------MHIKIDDLT----RQVVSLVNEHLHSMTLMSPPESIH-----ALGLEKLRGPEITFWSAWEGDELAGCGALKEL---DTRHGEIKSMRTSASHLRKGVAKQVLQHIIEEAEKRGYERLSLETGSSFEPARKLYESFGFQYCE-PFADYGEDPNSVFMTKKL
9	MUSTER	2q7bA	0.167	0.934	2.312	threading_9	----FQGEIKEYENNPYHLAQLVDLINYCQNIE---AKLDIKAEQDDIFQIENYYQNRKGQFWIALENEKVVGSIALLRI---DDKTAVLKKFFTYPKYRGNPLGRKLFERFLFARAS-KFTRIVLDTPEKEKRSHFFYENQGFKQITRDELDVDYIRDSRIYVKLL
10	SPARKS	2fiaa	0.168	0.928	2.303	threading_10	--------MKIRVADEKELPMILQFLTEVKAYMDVVGITQWTKDYPSQGDIQEDITK--KRLYLLVHEEMIFSMATFCM--EQEQDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHSLQMNRLDFGSFYLYVKEL

Predicted Tertiary Structure


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TM-score=0.720 to 1yvkA SCOP code=d.108.1.1	TM-score=0.907 to 1tiqA SCOP code=d.108.1.1	TM-score=0.720 to 1yvkA SCOP code=d.108.1.1	TM-score=0.756 to 1wwzA SCOP code=d.108.1.1	TM-score=0.720 to 1yvkA SCOP code=d.108.1.1