Template-based Modeling Results for YJGL_ECOLI

Submitted Primary Sequence

>Length 604
MSKISDLNYSQHITLADNFKQKSEVLNTWRVGMNDFARIAGGQDNRRNILSPGAFLEFLAKIFTLGYVDFSKRSNEAGRNMMAHIKSSSYSKDTNGNEKMKFYMNNPVGERADSPKVIIEISLSTITTMGTRQGHTAIIFPQPDGSTNRYEGKSFERKDESSLHLITNKVLACYQSEANKKIARLLNNNQELNNLQKLNNLQKLNNLLKLNNIQGLNNPQELNNPQNLNDSQELNNSQELNSPQELNDPQELNNSQDLNNSKVSCTVSVDSTITGLLKEPLNNALLAIRNEHLLLMPHVCDESISYLLGEKGILEEIDKLYALNDHGIDNDKVGNNEINDIKVNLSHILIDSLDDAKVNLTPVIDSILETFSKSPYINDVRILDWCFNKSMQYFDDTKKIKHACSVINHINLRSDQSKIAETLFFNLDKEPYKNSPELQGLIWNKLVVYVNEFNLSNREKTNLIQRLFDNVESIFNEVPVSILVNDIFMNDFFMKNPEMINWYFPQLLKSYEGEKIYFDNLKYDLNDNDKESNKEILKNQPDNVIKEKLNNEYKLRFRMMQTILQSRVNVLPYINEQRLNKLNPPENLRIAIEHFGWKNRPITA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKISDLNYSQHITLADNFKQKSEVLNTWRVGMNDFARIAGGQDNRRNILSPGAFLEFLAKIFTLGYVDFSKRSNEAGRNMMAHIKSSSYSKDTNGNEKMKFYMNNPVGERADSPKVIIEISLSTITTMGTRQGHTAIIFPQPDGSTNRYEGKSFERKDESSLHLITNKVLACYQSEANKKIARLLNNNQELNNLQKLNNLQKLNNLLKLNNIQGLNNPQELNNPQNLNDSQELNNSQELNSPQELNDPQELNNSQDLNNSKVSCTVSVDSTITGLLKEPLNNALLAIRNEHLLLMPHVCDESISYLLGEKGILEEIDKLYALNDHGIDNDKVGNNEINDIKVNLSHILIDSLDDAKVNLTPVIDSILETFSKSPYINDVRILDWCFNKSMQYFDDTKKIKHACSVINHINLRSDQSKIAETLFFNLDKEPYKNSPELQGLIWNKLVVYVNEFNLSNREKTNLIQRLFDNVESIFNEVPVSILVNDIFMNDFFMKNPEMINWYFPQLLKSYEGEKIYFDNLKYDLNDNDKESNKEILKNQPDNVIKEKLNNEYKLRFRMMQTILQSRVNVLPYINEQRLNKLNPPENLRIAIEHFGWKNRPITA
CCCCCCCCHHHHHHHHHCCCHHHHHHHHHEECCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKISDLNYSQHITLADNFKQKSEVLNTWRVGMNDFARIAGGQDNRRNILSPGAFLEFLAKIFTLGYVDFSKRSNEAGRNMMAHIKSSSYSKDTNGNEKMKFYMNNPVGERADSPKVIIEISLSTITTMGTRQGHTAIIFPQPDGSTNRYEGKSFERKDESSLHLITNKVLACYQSEANKKIARLLNNNQELNNLQKLNNLQKLNNLLKLNNIQGLNNPQELNNPQNLNDSQELNNSQELNSPQELNDPQELNNSQDLNNSKVSCTVSVDSTITGLLKEPLNNALLAIRNEHLLLMPHVCDESISYLLGEKGILEEIDKLYALNDHGIDNDKVGNNEINDIKVNLSHILIDSLDDAKVNLTPVIDSILETFSKSPYINDVRILDWCFNKSMQYFDDTKKIKHACSVINHINLRSDQSKIAETLFFNLDKEPYKNSPELQGLIWNKLVVYVNEFNLSNREKTNLIQRLFDNVESIFNEVPVSILVNDIFMNDFFMKNPEMINWYFPQLLKSYEGEKIYFDNLKYDLNDNDKESNKEILKNQPDNVIKEKLNNEYKLRFRMMQTILQSRVNVLPYINEQRLNKLNPPENLRIAIEHFGWKNRPITA
5442231102200101330331220021010001100210223223311101100020001001001010132123103100010212210222312100100111221331322200010000112221132111000022121222323132133433210100011001012120123013204132313223313222313222313222113222313233313223303122213233313222202223223223110211021002100220022002101222112212103210110013321132122012021121213321222011010100200022023130211200110011003012121030000001321312432310210010022031312121001100121233213223301000021000001313122321120012002101101230201000010001100121130010000200231321200012041212333332232004311331012312211201120021023120101210113212512223201100321213333234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSKISDLNYSQHITLADNFKQKSEVLNTWRVGMNDFARIAGGQDNRRNILSPGAFLEFLAKIFTLGYVDFSKRSNEAGRNMMAHIKSSSYSKDTNGNEKMKFYMNNPVGERADSPKVIIEISLSTITTMGTRQGHTAIIFPQPDGSTNRYEGKSFERKDESSLHLITNKVLACYQSEANKKIARLLNNNQELNNLQKLNNLQKLNNLLKLNNIQGLNNPQELNNPQNLNDSQELNNSQELNSPQELNDPQELNNSQDLNNSKVSCTVSVDSTITGLLKEPLNNALLAIRNEHLLLMPHVCDESISYLLGEKGILEEIDKLYALNDHGIDNDKVGNNEINDIKVNLSHILIDSLDDAKVNLTPVIDSILETFSKSPYINDVRILDWCFNKSMQYFDDTKKIKHACSVINHINLRSDQSKIAETLFFNLDKEPYKNSPELQGLIWNKLVVYVNEFNLSNREKTNLIQRLFDNVESIFNEVPVSILVNDIFMNDFFMKNPEMINWYFPQLLKSYEGEKIYFDNLKYDLNDNDKESNKEILKNQPDNVIKEKLNNEYKLRFRMMQTILQSRVNVLPYINEQRLNKLNPPENLRIAIEHFGWKNRPITA
1	PROSPECT2	1qbkb	0.091	0.982	2.234	threading_1	LKESQSPDTTIQRTVQQKLEQLNQYPDFNSLSGLILKNNVKAHFQNFPNGVTDFIKSECTTIASKGELQNWPDLLPQKICEDSAEILDSDRPLNIIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALLHIDSFTENLFAMDRLLPHHNIVEYLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDEDDDDDDEIDDDDTILDVLANVYRDELLPHILPLLKELLFHHESGILVLGAIAEGCQGIPYLPECLSDKKALVVSQPPDTYLKPLTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILY----------DAIGTLADSVGHHLNKPEYIQLPPLIQKWNLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQPDKDFIVALDLLSGLAEGLGGNIELTKACFQHVKPCIADFPILGTNLNQGIEQPYIPVLHQLVEPNTPKTLLENTAITIGRLGYVCPQEVAPLQQFIRPW-CTSLRNIRDNEEKDSAFRGISWINPKFYG
2	HHPRED-l	2qyu_A	0.200	0.685	1.671	threading_2	--------------------------------------------ATSSPSSPADWAKKLTETLTAADRDFSNADF----------RNITFSKPPSFMERDGDIIKGFNFSNSKFTYSD----ISHLHFDEC-------RFTYSTLSDVVCSNTKFSNSDMNEVFLQYSIT---TQQQPSFIDTTLKN-------------------------------TL-IRHKANLSGV---------------ILNEPDNSSP----PSVSGGGNF------------------IRGDIWLQMPLLWTENAVFLNHGKSILMTIDSL--------------PDKYSQEKVQAMEDLVKSLRGGRLTIRPVESSLVSVLAHPPYTQSALISEWLGPVQERFFA------HQCQTYNDVPLPAPQQRILPVLSFDRNSAMTGVDTDTRQKAAALYEQYLGLFDLSSQDTDTLLTMLNPTPDTAWNVSTAQISPVELFRHDF----PVFLAAFNQQATQRR--FGELIDII-----------------------LSTEEHGE--LNQQFLAATNQSTVKLIDDASVSRLAKL-SPAHYQHILSAYHLTDATPQ-
3	HHPRED-g	1y0f_A	0.095	0.591	2.915	threading_3	PAGKDGEAGAQGP-GPAGPAERGEQGPAGSAGK-GEQGV-GDLGA--GPSGARGERGF-GERGVEGP-GPPRGNGA-GNDGAKGDAGA-GA-GSQGA-RGAAGL-GPKGDRGDGKDGVRGLTGPIGP--GDKG-PGPAGFAGP-GAD-GAKGAKGDAGP-GPAGPAGP-GPIGNVGA-GP-GARGSAGP-GATGAAGRVGP-GPSGNAGP---AGKEGSKGPRGETGPA--PGPAGEKGAAGA-GTMGP-GLAGPKGDRGETGPAGP-GA-GA-GAPGPVGPAGKSGDAGPIGPVGPAGARGPQGPD-GETGEEGDQGP---PGS-GEPSGASGPAGPRGP-GS--AGS-GKDL-GPIGPRGRTGDAGPAGP--P----GPPSG-GYDLSFLPQPPQQK-------------AHDKG------------------------------------------------RYY----------------------------------------------------------------------------------------------------------------------------------------
4	PROSPECT2	1b3ua	0.085	0.861	1.976	threading_4	AAADGDDSLYPIAVLIDELREDVQLRLNSIKKLSTIALALGVERTRSELLGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAI-----SHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCY-------------------------PRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAK----------------------------------------VLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSARENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQ-LKDECPEVRLNIISNLDCNEVIGIRQLSQSLLPAIVELAED---AKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIRESNLKKLVEKFGKEWAHIPKVLAMSGDPNYLGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQK----IGPILDNSTLQSTQDQYFAQEALTVLS------LA
5	HHPRED-l	3nb2_A	0.169	0.695	1.335	threading_5	----------QGLSKA-ELTADLIWLSANRTGEESAE----------ELNYSGCDLSG----LSLVGLNLSSV----------NFS---------GAVLDDTDLRMSDLSQAVLENCSFKNILNECNFCYANLSNCIALFENSNFSNSNLKNASFKGSSYIQY--------PPILNEADLTGAIIIP-------------------------------------GMVLSGA-------I------LGDV-KELFSEKSNTINLGGCYIDQENIL--------------------------SVLDNYTKSNKSILLTMNTS--------------DDKYNHDKVRAAEELIKKISLDELAFRPYKMSLADSFSIHPYLNNANIQQWLEPICDDFFD------TIMSWFNNSIMMYNGSLLQAGMYFERHPGAMYNSSFMQERFRELYETQQSDFGLCSQDLSHMVDMLSPNTSTNWVQNTFGYSLSNLFSESFPI----FSIPYHKAFSQN-F-VSGILDIL----------------------------ISDNELKERFIEALNSSDYKMIADDQQRKLACVDSPEILRRYANQFDILDRLQG-
6	HHPRED-g	1y0f_B	0.128	0.570	2.834	threading_6	A-GPDGNNGAQGP-GLQGQGEKGEQGPAGP-GFQGL-GPAGPAGEAGERGLHGEERGP-GERGAAGPPAGARGIGE-GPVGPSGFA---GPAGAAGQ--GERGTKGPVGEQGQGP-GPVGAAGPAGP-RGDAGPTGMTGF-GAAGRTAGKEGIRGPRGDQGPVGRSGETGATGPTGFVGEKGE-GSAGP---PGPQGLLGA-GFLGL-GSRGERGE-GPLGIAGP-GARGP-GNVGN-GVNGAAGNDGP-GQ-GHKGERGT-GNAGP-GAVGPVGPVGEPGKLGNRGE-GPAGAVGPAGAQGIRGDI-GDRGHNGLQGL-GLAGHHGDPAGPRGPAGPSGPAGKIAVGPAGAAGIRGSSQGPAGP---PGP----PS-G--GYEF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	PROSPECT2	1qgra	0.086	0.987	1.968	threading_7	MNPGNSQVQIKNSLTSKDPDIKAQYQQRWLAIDANVLHTLGTETYRNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSRHFIMQVVCEATQCPDTRVRVAALQN-LVKIMSLYYQYMETYM-----GPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNKEHIKNPDWRYRLEGPEPSELMKDPSVVLLPEAAINDVYLAPLLQCLIEGLSAAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIQKLLETTDRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQQSLLCATLQNVLRKVQHQDALQISDVVMASLMFSGGVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQLAAVGLVGDLCRALQSNIIPFCDEVM--QLLLENLGNENVHRILSVFGDIALAIGGENTLQQASQAQVDKSDYDMVDYLNEQENVHPDVMLVQPRVEFILSFIDHIAGDEDHLCTAFGKDVLKLVEARPMIHELLTEGRRSKTNNQA
8	HHPRED-g	1y0f_B	0.108	0.644	2.803	threading_8	DGGPAGPRGEAGAIGPTGE-GKGEKGNVGLAGARGA-GPDGNNGALQGVQGEKGEQGPAGP-GFQGL-GPAAG-GERGLHGEFGL-GPAGERGP-GER-GAAGPTGSRGPSGDGNKGEAGI-GVAGVA-GLRGL-GAIGA-GPAGGARGEGGPAGARGIRGERGE-GPVGPSGFAGPAGAAGQ-GA-GERGTKGPVGEQGPVGPQGPVGAAGP-GPAGPAGPRGP---PGAAGKEGIRGPRGDQGPVGETGATGPTGFVGEKGPLGL-GSRGERGL-GVAGSAGP-GARGP-GNVGN-GVNGADGPRDGQ-GHKGERGT-GNAGPVGKPAGAVGPAGAVGPRGP--SGPQGIRDRGHNGLQGL-GLAGPRGPAGPSGPAGKIGRIGAVGP----------------AGAAGIRGSQGSQGP---AG-P---P----GPPS--------G--GYEF-----------------------------------------------------------------------------------------------------------------------------------------------------
9	PROSPECT2	1w63A	0.105	0.899	1.924	threading_9	MPAPI--RLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT----YRCRNVAKLLYMHMLGYLKLIASQKFTDKRIGYLGAMLLL---DERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLA---------GEVEKLLKTSNSYLRKKAALCAVHVIRKELMEMFLPATKNLLNEKNHGVLHTSVVL-----------------LTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEA---------MNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRV---LAINILGRFLLNNDKNIRYVALTSLLKTVQ----TDHNAVQRHRSTIVDCLLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLD----SCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVP------NLIQLITNSVEMHAYTVQRLYKAYSQQPLVLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYLTAIMKLSTRFTCTVNRIKKVSIYGSSIDVELQQMRSALLERMPVMEK
10	HHPRED-g	1y0f_A	0.120	0.512	2.761	threading_10	-GGA-GLQGM-GERGAAL-GPKG-----D-RGDAGPKGADGAPGKDGVRGLTGGPAGA-GDKGEAGPPAGPTGAGE---PGPAGFDGQ-GAKGDAGP-IGNVGA-GP-GARGSGP-GATGF-GAAGR-VGP-GPSGNAGP---PGP-AGKEGSKGPRGETGPAGR---PGPAGEKGA-GIAGQVGL-GQRGERGF-GL-GPSGERGP-GPMGP-GLAGP-GESGREGA-GDRGETGPAGP-GA-GA-GAPGPVGPAGKSGETGPIGPVGPAGARGPAGP---PGS-GEQGPSGASGPRGP-GSAGSLNGL-GPIG--GPRGRTGDAG--PGP----GPPSGGYDLSFLPQPPQQKAHDKG--------RYY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.862 to 1b3uA SCOP code=a.118.1.2	TM-score=0.689 to 1qbkB SCOP code=a.118.1.1	TM-score=0.463 to 2bm5A SCOP code=b.80.8.1	TM-score=0.754 to 1w63C SCOP code=i.23.1.1	TM-score=0.811 to 1b3uA SCOP code=a.118.1.2