Template-based Modeling Results for YJGJ_ECOLI

Submitted Primary Sequence

>Length 197
MVTKKQSRVPGRPRRFAPEQAISAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQRAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAAMAGEAIKTILEE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVTKKQSRVPGRPRRFAPEQAISAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQRAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAAMAGEAIKTILEE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MVTKKQSRVPGRPRRFAPEQAISAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQRAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAAMAGEAIKTILEE
55344323221223422031001000200133003100011003202021100110021110001200220021102101201333321020012002200221133210100100101222233023002200210120012002322333030002000000100001032222231011002000200321134
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MVTKKQSRVPGRPRRFAPEQAISAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQRAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAAMAGEAIKTILEE
1	MUSTER	3eupA	0.132	0.964	1.924	threading_1	-------QAMKELSKSDRQFIIESTAPVFNVKGLAGTSLTDLTEATNLTKGSIYGNFENKEAVAIAAFDYNWGHVKSVLTAKVQACNTYKEMLLVYSSMYNDADGSLFPVGGCPLLNTTIETHDALRKKAGEAILSWKKNLVTIIKKGIQADVTKIAFSMIALVEGAILIHRATKNRAYSDYVFESLEDLIAGIVKK
2	SPARKS	3qbma	0.152	0.934	2.505	threading_2	----------GRKGQETRERVVAQAAALFNVSGYAGTAISDIAA-TGLEKGGIYRHFESKEQLALAAFDYAAEKVRERFAVGLAGHKHTVDTIIAFLDVFRSYAERPPLVGGCPILNTAIESDDPLRERVRAVIDEWRETIRTLVQTGIARDADRLALLIIATEGA--VLARILETATPLEHAYTHLATYITQQVRL
3	PROSPECT2	3eupA	0.141	0.975	2.367	threading_3	-----QAMKELSKSDRTRQFIIESTAPVFNVKGLAGTSLTDLTEATNLTKGSIYGNFENKEAVAIAAFDYNWGHVKSVLTAKVQACNTYKEMLLVYSSMYNDADGSLFPVGGCPLLNTTIDTHDALRKKAGEAILSWKKNLVTIIKKRPDTDVTKIAFSMIALVEGAILIHRATKNRAYSDYVFESLEDLIAGIVKK
4	PPA-I	3eupA	0.135	0.975	1.586	threading_4	-----QAMKELSKSDRTRQFIIESTAPVFNVKGLAGTSLTDLTEATNLTKGSIYGNFENKEAVAIAAFDYNWGHVKSVLTAKVQACNTYKEMLLVYSSMYNDADGSLFPVGGCPLLNTTIETHDALRKKAGEAILSWKKNLVTIIKKGPDTDVTKIAFSMIALVEGAILIHRATKNRAYSDYVFESLEDLIAGIEVK
5	HHPRED-l	2i10_A	0.270	0.827	1.551	threading_5	----------------DDQVALQTA-ELFWRQGYEGTSITDLTKALGINPPSLYAAFGSKRDLFEKTLDRY-CERTLQLEEA-VR-PTAHEAVLDFLTGRVEVFT------GC-TGLASGEPHHEIVDLLTAAREQ-RQTVLDRFEDGAGTDCTALARYV-AAVYGLSVEAASGAPREELTAAAILAAQVVP-----
6	HHPRED-g	2i10_A	0.270	0.827	1.693	threading_6	----------------DDQVALQTA-ELFWRQGYEGTSITDLTKALGINPPSLYAAFGSKRDLFEKTLDRY-CERTLQLEEA-VR-PTAHEAVLDFLTGRVEVFT------GC-TVQAGLAPHHEIVDLLTAAREQ-RQTVLDRFEKALATDCTALARYV-AAVYGLSVEAASGAPREELTAAAILAAQVVP-----
7	SP3	3qbma	0.158	0.934	2.592	threading_7	----------GRKGQETRERVVAQAAALFNVSGYAGTAISDIAA-TGLEKGGIYRHFESKEQLALAAFDYAAEKVRERFAVGLAGHKHTVDTIIAFLDVFRSYAERPPLVGGCPILNTAIESDDPLRERVRAVIDEWRETIRTLVQTGIARDADRLALLIIA-TEGA-VLARILETATPLEHAYTHLATYITQQVRL
8	SAM-T99	2i10B	0.262	0.853	2.295	threading_8	------------------DQVALQTAELFWRQGYEGTSITDLTKALGINPPSLYAAFGSKRDLFEKTLDRYCERTLQLEEA---VRPTAHEAVLDFLTGRVEVFTGQPF--GCTVQAGLASPHHEIAREQRQTVLDRFEKALADGDLPAGTDCTALARYVAAVY-GLSVEAASGAPREELTAAAILAAQVVP-----
9	MUSTER	2hyjA	0.132	0.924	1.855	threading_9	----------AEAQA-TRGRILGRAAEIASEEGLDGITIGRLAEELEMSKSGVHKHFGTKETLQISTLDKAFVDFWHRVVEPALAEPPGLRRLRAVCANSVGYLEEPLLPGGCLLTAALSERPGRVRDAVAEVWSRWREQLRADLTAAVDKDVEQALFEIVAAGLALNAAMQLQHDR----TAADRARRAIERALAQ
10	SPARKS	3on4a	0.148	0.924	2.368	threading_10	----------NAPNISNKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVISWHTDKIAAVLSDISNNSSSAKEKIQKFFDAILTLTYNSENKCLGGFASDFQSLPVSIQNQAKKFFELIIEWLKGVLETNGYDSSLSLAKQIISLVEGGLLLARLYGDETFLEGVRHFIDQTIK-----

Predicted Tertiary Structure


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TM-score=0.776 to 1sgmA SCOP code=a.4.1.9	TM-score=0.783 to 1sgmA SCOP code=a.4.1.9	TM-score=0.787 to 2hyjA SCOP code=a.4.1.9	TM-score=0.784 to 2g7sA SCOP code=a.4.1.9	TM-score=0.794 to 2g7sA SCOP code=a.4.1.9