Template-based Modeling Results for YJGI_ECOLI

Submitted Primary Sequence

>Length 237
MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
442231110000001200000002201321020000101233003200320111001021012300120034012000000000002101022022310230030002001100120031024101000000010131211010000001000100020003100421000000000001031132323012102320103221203100000010002211101000010111225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
1	MUSTER	2pd6D	0.270	0.983	2.345	threading_1	-NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACD-LDRAAAQETVRLLNHAAFQADVSERCLLEQVQACFSRPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGSIINISSIVGK-VGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLF-
2	SPARKS	3pk0a	0.254	0.996	2.100	threading_2	MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAG-RSTADIDACVADLDVIGVQTDVSDDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL
3	PROSPECT2	3v2gA	0.438	0.992	3.544	threading_3	SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIRAVAIRADNRDAEAIEETVEALGGLDILVNSAGIWHSAPLEETTVADFDEV-AVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDNP-ADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGANA
4	PPA-I	2pd6D	0.270	0.983	1.860	threading_4	-NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACD-LDRAAAQETVRLLNHAAFQADVSERCLLEQVQACFSRPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGSIINISSIVGK-VGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLF-
5	HHPRED-l	3ak4_A	0.295	0.987	1.500	threading_5	IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMA-AQAVVAGLEGFAVEVDVTKRASVDAAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLAKGVIVNTASLAA-KVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQERPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVR-
6	HHPRED-g	3ak4_A	0.298	0.992	1.323	threading_6	IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADL-DVMAAQAVVAGLENGAVEVDVTKRASVDAAMDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLTKGVIVNTASLAAK-VGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQERPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVRM
7	SP3	3pk0a	0.254	0.996	2.113	threading_7	MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGR-STADIDACVADLKVIGVQTDVSDDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL
8	SAM-T99	2uvdA	0.299	0.987	1.502	threading_8	M--LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEVVDEIKKLGSDAIAVRADVANAEMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRHGRIVNIASVVG-VTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGMVM
9	MUSTER	2uvdA	0.303	0.987	2.321	threading_9	M--LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLAVRADVANTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRHGRIVNIASVVGV-TGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGMVM
10	SPARKS	3riha	0.275	0.996	2.086	threading_10	MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAA-RSPRELSSVTAELNVIGVRLDVSDADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.928 to 1vl8B SCOP code=c.2.1.2	TM-score=0.926 to 1vl8B SCOP code=c.2.1.2	TM-score=0.923 to 1q7bA SCOP code=c.2.1.2	TM-score=0.918 to 1edoA SCOP code=c.2.1.2	TM-score=0.928 to 1vl8B SCOP code=c.2.1.2