Template-based Modeling Results for YJFJ_ECOLI

Submitted Primary Sequence

>Length 232
MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDKAGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLENLITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTVGASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSSAQDVLARLQRQQGE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDKAGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLENLITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTVGASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSSAQDVLARLQRQQGE
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDKAGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLENLITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTVGASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSSAQDVLARLQRQQGE
4311210111021001201310321300200211023033313301311121113122123313312321121121013013342222001200310141232132123112213311200141012023201312221201201210120131122222122020220020032023322333111200220343232430121024120112231203101321343334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDKAGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLENLITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTVGASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSSAQDVLARLQRQQGE
1	PROSPECT2	1u4qA	0.128	0.974	1.459	threading_1	ANKQQNFNTGIKDFDFWLSEVEADLASVNNLLKKHQLLEADISAHEDRLKDLNSKRETINGRFQRIKSMAAARRAKLNESHRYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCA------NGEDLIKKNNHHVENITASDLEKAAAQRKDE
2	PPA-I	3lbxB	0.123	0.772	1.140	threading_2	------------GSTADKFRFFS---MARDLLSWMESIIRQIETQERDVSLLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQ-------------ASEEIREKLQQVMSRRKEMNEKWEARWERLRMLLEVCQFSRDASVAEAWLIAQEPYLASGD-FGHTVDSVEKLIKRHEAFEKSTASWAERFAALEKPTTLELKERQIAE------------------------
3	PROSPECT2	2dgjA	0.147	0.970	1.324	threading_3	AGQLQHGIDDENATKQTQKYRDAEQSKKTAYDQAVAAAKAILNKQDKAAVDRALQQVTSTKDALNGDAKLAEAKAAARQNLGTLNHNAQRTALEGQINQTVDGVNTVKTNANTLDGAN-SLQGAINDKDATLRNQNYLESKRNAYTQAVTAAEGILNKQTGGNTSKADVDNALNAVTRAKAARNAKTSATNTINGLPNLTQLKHQVEQA----QNVVGVNGVKDKGN--LEH
4	PPA-I	2dgjA	0.159	0.974	1.060	threading_4	AGQLQHGIDDENATKQTQKYRDAEQSKKTAYDQAVAAAKAILNKQDKAAVDRALQQVTSTKDALNGDAKLAEAKAAARQNLGTLNHQRTALEGQINQATTVDGVNTVKTNANTLDGANSLQGAINDKDATLRQNYLDESKRNAYTQAVTAAEGILNKQTGGNTSDVDNALNAVTRAKAALNGAENLRNAKTSATNTINGLPLKHQVEQA----QNVVGVNGVKDKGNLEH--
5	PROSPECT2	1s35A	0.087	0.845	1.284	threading_5	EQAFLQDLDDFQAWLSITQKAVASEDMPESLP---------------EAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPE-----YLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLGFQEFQKDAKQAEAILSNQEYTLA--------HLEPPDSLEAAEAGIRKFEDFLGSMENNRDKVLSPVD------SGNKLVAEG--NLYSDKIKEKVQLIEDRRDN
6	PPA-I	2qihB	0.102	0.591	1.015	threading_6	-------------------NTDRIATAELGIAENKKDAQIAKAQANENKDGIAKNQADIQLHDKKITNLGILHSMVARAVGNN---TQGVATNKADIAKNQADIANNIKNIYELAQQQDQHSSDIKTLAKVSAANTDRIAKNKAEADASFETLTKNQKL-------------------------------------------------------------------------
7	PROSPECT2	1t33A	0.100	0.901	1.218	threading_7	MNGEQAKSQLIAAALAQFGEYGLHA-TTRDIAALAGQNIAAITYYKEDLYLACAQ-----WIADFLGEKFRPHAEKAERLFSQPAPRDAIRELILLACKNMIMLLTQEDTVNLS-----KFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAF---RLGKETILLRTGWPQFDEEKAELIYQT---------VTCHIDLILHGLTQ
8	PPA-I	2b5uA3	0.107	0.603	1.003	threading_8	-----------------PVEAAE--RNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIKQFNRFAHDPMAGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKSDADAALSSAMESRKKKEDKKRSAENNLNDEKNKPR-------------------------------------------------------------------------
9	PROSPECT2	3edvA	0.124	0.970	1.214	threading_9	-SHMRHRLFQLNREVDDLEQWIADYEHVTMLQERFREFARDTGNIGQEAATIAEWKDGLNEAWADLLELIDTRTQILAASYELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAALDACESRRVRLVDTGDKFRFFSMVRDLMLWMEDEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIE------LGKSLLARKHYASEEIKEKEMIDKWEDRWEW
10	MUSTER	2dgjA	0.152	0.961	0.927	threading_10	AGQLQHGIDDENATKQTQKYRDAEQSKKTAYDQAVAAAKAILNKQKAAVDRALQQVTSTKDALN-GDAKLAEAKAAARQNLGTLNHTNAQRTALEGQINQVDGVNTVKTNANTLDGANSLQGAINDKDATLRQNYLDESKRNAYTQAVTAAEGILNKQ-TGGNTSKADVDNALNAVTRAKAARNAKTSATNTINGLPN-DNLKHQVEQA----QNVVGVNGVKDKGNLEH--

Predicted Tertiary Structure


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TM-score=0.474 to 2d2sA SCOP code=a.118.17.2	TM-score=0.641 to 1cunA SCOP code=a.7.1.1	TM-score=0.603 to 1xvhA SCOP code=a.8.1.2	TM-score=0.694 to 1xvhA SCOP code=a.8.1.2	TM-score=0.711 to 1s35A SCOP code=a.7.1.1