Template-based Modeling Results for YJES_ECOLI

Submitted Primary Sequence

>Length 379
MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWLDKQYHGEMDWMARHGMLRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVSRYALGRDYHKLLRNRLKKLGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKHSLILNREAGSFFFLGELLVDIPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEELRPLMGNRIYGCDDCQLICPWNRYSQLTTEEDFSPRKPLHAPELIELFAWSEEKFLKVTEGSAIRRIGHLRWLRNIAVALGNAPWDETILTALESRKGEHPLLDEHIAWAIAQQIERRNACIVEVQLPKKQRLVRVIEKGLPRDA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWLDKQYHGEMDWMARHGMLRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVSRYALGRDYHKLLRNRLKKLGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKHSLILNREAGSFFFLGELLVDIPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEELRPLMGNRIYGCDDCQLICPWNRYSQLTTEEDFSPRKPLHAPELIELFAWSEEKFLKVTEGSAIRRIGHLRWLRNIAVALGNAPWDETILTALESRKGEHPLLDEHIAWAIAQQIERRNACIVEVQLPKKQRLVRVIEKGLPRDA
CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCEECCCCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCHHCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWLDKQYHGEMDWMARHGMLRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVSRYALGRDYHKLLRNRLKKLGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKHSLILNREAGSFFFLGELLVDIPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEELRPLMGNRIYGCDDCQLICPWNRYSQLTTEEDFSPRKPLHAPELIELFAWSEEKFLKVTEGSAIRRIGHLRWLRNIAVALGNAPWDETILTALESRKGEHPLLDEHIAWAIAQQIERRNACIVEVQLPKKQRLVRVIEKGLPRDA
5533212320031013002401011000020212301210210123311131311242122312032003201100000011122222222224323200001001021002002210320020023202212010002101001100023010020031100003310100000000010203233223300130100032012100233221103101110123232202320121122202001100100112332321223201123212102012001111320241031110211112200000000021132230021013124131310120010002221343322112122332330021123102334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWLDKQYHGEMDWMARHGMLRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVSRYALGRDYHKLLRNRLKKLGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKHSLILNREAGSFFFLGELLVDIPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEELRPLMGNRIYGCDDCQLICPWNRYSQLTTEEDFSPRKPLHAPELIELFAWSEEKFLKVTEGSAIRRIGHLRWLRNIAVALGNAPWDETILTALESRKGEHPLLDEHIAWAIAQQIERRNACIVEVQLPKKQRLVRVIEKGLPRDA
1	PROSPECT2	3qxyA	0.090	0.910	1.354	threading_1	L-------DPVACFLSWCRRVGLPKVAVSRQHTCSIGGLLERERVALQSQSGWLLHELQAPASRWRPYFA------------LWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKDLANIRSEYQSEAHPDLFSLRVRSLELYHQLVALVMAYSFQEPNSPVMVPLANHNANLLRMVATQPIPKGHEIFNTYGQIHMYGFVEPYPDNTDDTDIQMVTVREAALQGTKTEAERHLVYERWDF-----LCKLEMVGEEGAFVIGREEVLTEEELTT--TLKVLCMPAEEFRELREEGSLTITNIPKLKASWRQLL-----QNSVLLTLQTYATDLKTDQGLLSNKEVYAKLSWREQQALQVRYGQKMILHQLLELT---S
2	HHPRED-l	1hfe_L	0.184	0.488	1.621	threading_2	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRTVMERITPDPKADPDKLVDAKCIGCDTCSQYCPTAAIFGEGIPHIEACI------------------------NCGQCLTHCPENAIYEQSWVPEVDGKVAMPAPALGDAFGMPTGAALQKLGFAHCWDTEFDVTIWEFVERLTKKSDCPGWPELLPHFSCKSPIGMNGALYGAERMKYDPIAKKYEGLRPETRELAYMIKKAGIDD-
3	HHPRED-g	2fgo_A	0.269	0.206	1.375	threading_3	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLKITDDCINCDVCEPECPNGAISQGYVIDPNLCTECV-----GHYD-------------EPQCQQVCPVDCIP-------LDDANVESKDQLM-------EKYRKITGK------------------------------------------------------------------------------------
4	SAM-T99	2fgoA	0.231	0.206	1.250	threading_4	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLKITDDCINCDVCEPECPNGAISQGYVIDPNLCTECVGHYDEP------------------QCQQVCP--------------------------------------------------------------------------------------------------VDCIPLDDANVESKDQLMEKYRKITGK
5	PROSPECT2	1ejlI	0.079	0.902	1.329	threading_5	GTVNWSVEDIVKGIN--------------SNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKSFLGKTDCSAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIA-------------GDGSAFRDLVIKHGAIDPLLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPL--DAVEQILPTL--VRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKG--VVPQLVKLLGATE--LPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVF--PSLLTNPKTNIQKEATWTMSNITAHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGEKLSIMIEECGGLDS
6	HHPRED-l	2fgo_A	0.256	0.206	1.620	threading_6	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLKITDDCINCDVCEPECPNGAISQGYVIDPNLCTECVG---HYD---------------EPQCQQVCPVDCIP---LDDANV-------ESKDQLM----EKYRKITGK------------------------------------------------------------------------------------
7	HHPRED-g	1h98_A	0.246	0.182	1.375	threading_7	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHCEPCIGVQSCVEVCPVECIYDQFYIH------------------------PEECIDCGACVPACPVNAIY---PEEDVP-EQWKSYIEKRKLAGL-----------------------------------------------------------------------------------------------
8	SAM-T99	1bqxA	0.259	0.153	1.171	threading_8	------------------------------------------------------------------------------------------------------------------------------------ITEPCIGTK------------------------------------------------------CASCVEVCPVDCIHEGYYIDPDVCID------------------------CGACEAVCPVSAIYHEDFVPEEW---------------------------------------------------------------------------------------------------------------
9	PROSPECT2	1jdha	0.081	0.979	1.320	threading_9	LLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDHHREGLLAIFKGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGNKTNVKFLAITTDNQESKLIIEKLLWTTSRVLKVLSVCSSNKLHLTDPSQRLVQNCLWT-LRNLSDAA----TKQEGMEGLLGTLVQLLGSDDINVTCNNYKNKMMVCQVGGIEAAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKARNLALCPANHQGAIPRLVQLLVRAHQDTQFVEGV---RMEEIVEGCTGALHILARDVHIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAELLHSRNEGVATYAAAVLFRMS
10	HHPRED-l	3eun_A	0.256	0.206	1.619	threading_10	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALMITDECINCDVCEPECPNGAISETYVIEPSLCTECVG---H---------------YETSQCVEVCPVDAI-------IKDPSHE---ETEDEL----RAKYERITGE------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.536 to 1p0yB SCOP code=a.166.1.1	TM-score=0.405 to 1durA SCOP code=d.58.1.1	TM-score=0.548 to 1rgvA SCOP code=d.58.1.1	TM-score=0.557 to 1rgvA SCOP code=d.58.1.1	TM-score=0.809 to 1ialA SCOP code=a.118.1.1