Template-based Modeling Results for YJDC_ECOLI

Submitted Primary Sequence

>Length 191
MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPDKEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIAACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRMLVNRSQADVDTAHRLAEDILRFARCRQGGALT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPDKEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIAACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRMLVNRSQADVDTAHRLAEDILRFARCRQGGALT
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPDKEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIAACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRMLVNRSQADVDTAHRLAEDILRFARCRQGGALT
44132011201300232002201021003303110310121022111001200210031012102101223232132101000200020032341200100000121232222012002301210020012002204232121002000000100001010232321021013002200200213322224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPDKEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIAACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRMLVNRSQADVDTAHRLAEDILRFARCRQGGALT
1	MUSTER	1sgmA	0.162	0.937	2.069	threading_1	DSREKILHTASRLSQLQGYHATGLNQIVKESGAPKGSLYHFFPNKEELAIEAVTYTGKIVEHLIQQSMDESS-DPVEAIQLFIKKTASQFDNTSIKGIPVGLLASETALISEPLRTVCMKVFKSWEAVFARKLMENGFAEANQLGTLINSMIEGGIMLSLTNKDKTPLLLIAEQIPVLVR-----------
2	SPARKS	3on4a	0.140	0.932	2.935	threading_2	NTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVISWHTDKIAAVLSDISNNSSLSAKEKIQKFFDAILTLTYNS--ENKCLGGFASDFQSLPVSIQNQAKKFFELIIEWLKGVLETNGYDSSLSLAKQIISLVEGGLLLARLYGDETFLEGVRHFIDQTIK-----------
3	PROSPECT2	3g7rA	0.193	0.948	2.277	threading_3	NLRARLLGTATRIFYAEGIHSVGIDRITAEAQVTRATLYRHFSGKDDLILAYLDQADRGIRAQVTAARGS-SPAADGQVRAVARSIVDGIRSPGFRGCAFLNAVAEYPDPAHPVHRAVLAHRQWFLDTVTELLAQVGDGDGVAAGRHL-VLRDGAAAGCL-FDPELVSETFLHGVEGVLRDVS-------E
4	PPA-I	3on4A	0.140	0.932	1.691	threading_4	NTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVISWHTDKIAAVLSDISNNSSLSAKEKIQKFFDAILTLTYNSE--NKCLGGFASDFQSLPVSIQNQAKKFFELIIEWLKGVLETNGYDSSLSLAKQIISLVEGGLLLARLYGDETFLEGVRHFIDQTIK-----------
5	HHPRED-l	3g7r_A	0.188	0.948	1.457	threading_5	EARARLLGTATRIFYAEGIHSVGIDRITAEAQVTRATLYRHFSGKDDLILAYLDQADRGIRAQVTAARGSS-PAADGQVRAVARSIVDGIRSPGFRGCAFLNAVAEYPDPAHPVHRAVLAHRQWFLDTVTELLAQVGDGDGVAAGRHLV-LRDGA-AAGCLFDPELVSETFLHGVEGVLRDVSE-------
6	HHPRED-g	3bru_A	0.125	0.921	1.389	threading_6	LAHQSLIRAGLEHLTEKGYSSVGVDEILKAARVPKGSFYHYFRNKADFGLALIEAYDTYFARLLDQAFLDGSLAPLARLRLFTR-AEEG-ARHGFRGCLVGNLGQE-GALPDDFRAALIGVLETWQRRTAQLFREAQAHDPDALAEAFWIGWEGAILRAKLELRPDPLHSFTRTGRHFV------------
7	SP3	3on4a	0.140	0.932	2.947	threading_7	NTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVISWHTDKIAAVLSDISNNSSLSAKEKIQKFFDAILTLTYNSE--NKCLGGFASDFQSLPVSIQNQAKKFFELIIEWLKGVLETNGYDSSLSLAKQIISLVEGGLLLARLYGDETFLEGVRHFIDQTIK-----------
8	SAM-T99	3g7rB	0.211	0.916	1.946	threading_8	--RARLLGTATRIFYAEGIHSVGIDRITAEAQVTRATLYRHFSGKDDLILAYLDQADRGIRAQVTAAR-GSSPAADGQVRAVARSIVDGIRSPGFRGCAFLNAVAEYPDPAHPVHRAVLAHRQWFLDTVTELLAQVGD--GDGVAAGRHLVLRDGAAAGCLFDPELVSETFLHGVEGVLR-----------
9	MUSTER	3on4A	0.140	0.932	2.031	threading_9	NTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVISWHTDKIAAVLSDISNNSSLSAKEKIQKFFDAILTLTYNSE--NKCLGGFASDFQSLPVSIQNQAKKFFELIIEWLKGVLETNGYDSSLSLAKQIISLVEGGLLLARLYGDETFLEGVRHFIDQTIK-----------
10	SPARKS	3jsja	0.184	0.937	2.559	threading_10	SPRERLLEAAAALTYRDGV-GIGVEALCKAAGVSKR-SYQLFESKDELLAASLKERSAAFVAKALPPA-DDGRSPRERILYVFERVESQAGAPDFQGCRYLAVQIELKDQAHPASRVAYQIKADL-AFFRSEAERGGASDPDLLARQLILVFDGASARAGIGADN-LTGLIVPTLTTLLDAADH-------

Predicted Tertiary Structure


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TM-score=0.946 to 1sgmA SCOP code=a.4.1.9	TM-score=0.947 to 1sgmA SCOP code=a.4.1.9	TM-score=0.865 to 2g7sA SCOP code=a.4.1.9	TM-score=0.743 to 2g7sA SCOP code=a.4.1.9	TM-score=0.857 to 2g7sA SCOP code=a.4.1.9