Template-based Modeling Results for YJCO_ECOLI


  Submitted Primary Sequence

>Length 229
MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADSWFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYSEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDTGCEEFEKLTNG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADSWFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYSEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDTGCEEFEKLTNG
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADSWFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYSEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDTGCEEFEKLTNG
3231001001112213221220020012004211230011001001221202200200120032211200010010122330221122013001200412133000000000123320331032002001100322333101200010000012021031113200200120032231110011000001202322033113201200110032113200210231235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADSWFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYSEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDTGCEEFEKLTNG
1MUSTER3rjvA0.6440.8952.957threading_1--------------------EPGSQYQQQAEAGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDA-AVDAQLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGFQQGEKGF--IEPNKQKALHWLNVSCLEGFDTGCEEFDRISK-
2SPARKS2xm6a0.1890.9695.546threading_2AQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGQDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGGVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ----GNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSAT-SGDELGQLHLADMYYFGIG--VTQDYTQSRVLFSQSAEQGNSIAQFRLGYILQG
3PROSPECT23rjvA0.6530.8823.067threading_3--------------------EPGSQYQQQAEAGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARD----SESDAAVDLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGFQQGEKGF--IEPNKQKALHWLNVSCLEGFDTGCEEFDRISK-
4PPA-I3rjvA0.6440.8954.897threading_4--------------------EPGSQYQQQAEAGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDA-AVDAQLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGFQQGEKGF--IEPNKQKALHWLNVSCLEGFDTGCEEFDRISK-
5HHPRED-l1ouv_A0.1610.9743.702threading_5--DPKELVGLGASYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDKYAEGCASLGGIYHDGKVVTRDFKKDLKKALASYDKACDLKDSPGCFNAGNMYHHG-EGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEG--VTRNEKQAIENFKKGCKLGAKGACDILKQLKI-
6HHPRED-g1ouv_A0.2030.9693.127threading_6GCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQNTNKALQYYSKACDLKYAEGCASLGGIYHDGVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL----KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACE-LENGGGCFNLGAMQYNGEG--VTRNEKQAIENFKKGCKLGAKGACDILKQLKIK
7SP32xm6a0.1890.9695.670threading_7AQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGQDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGGVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ----GNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSAT-SGDELGQLHLADMYYFGIG--VTQDYTQSRVLFSQSAEQGNSIAQFRLGYILQG
8SAM-T992xm6A0.2020.9745.834threading_8AQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGQDYAQAVIWYKKAALKGLPQAQQNLGVMYHGNGVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAE----QGNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSGDELAAQFNLGNALLQGKG--VKKDEQQAAIWMRKAAEQGLSAAQVQLGEIYYY
9MUSTER1ouvA0.2030.9692.793threading_9GCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQNTNKALQYYSKACDLKYAEGCASLGGIYHDGVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL----KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACE-LENGGGCFNLGAMQYNGEG--VTRNEKQAIENFKKGCKLGAKGACDILKQLKKV
10SPARKS3rjva0.6440.8954.796threading_10--------------------EPGSQYQQQAEAGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDA-AVDAQLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGFQQGEKGF--IEPNKQKALHWLNVSCLEGFDTGCEEFDRISK-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.569 to 1w3bA
SCOP code=a.118.8.1
TM-score=0.885 to 1ouvA
SCOP code=a.118.18.1
TM-score=0.784 to 1ouvA
SCOP code=a.118.18.1
TM-score=0.569 to 1w3bA
SCOP code=a.118.8.1
TM-score=0.569 to 1w3bA
SCOP code=a.118.8.1