Template-based Modeling Results for YJCE_ECOLI

Submitted Primary Sequence

>Length 549
MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWPTFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGFLIYWVVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGLVSLKFAVAVAMGTMIFTVGGATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEPATQIVLLFLLPFASYLIAEHIGVSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWAMLEFVFNGMVFLLLGLQLPGILETSLMAAEIDPNVEIWMLFTNIILIYAALMLVRFGWLWTMKKFSNRFLKKKPMEFGSWTTREILIASFAGVRGAITLAGVLSIPLLLPDGNVFPARYELVFLAAGVILFSLFVGVVMLPILLQHIEVADHSQQLKEERIARAATAEVAIVAIQKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSVQEENLERRFRLAALRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEENQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWPTFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGFLIYWVVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGLVSLKFAVAVAMGTMIFTVGGATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEPATQIVLLFLLPFASYLIAEHIGVSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWAMLEFVFNGMVFLLLGLQLPGILETSLMAAEIDPNVEIWMLFTNIILIYAALMLVRFGWLWTMKKFSNRFLKKKPMEFGSWTTREILIASFAGVRGAITLAGVLSIPLLLPDGNVFPARYELVFLAAGVILFSLFVGVVMLPILLQHIEVADHSQQLKEERIARAATAEVAIVAIQKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSVQEENLERRFRLAALRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEENQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWPTFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGFLIYWVVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGLVSLKFAVAVAMGTMIFTVGGATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEPATQIVLLFLLPFASYLIAEHIGVSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWAMLEFVFNGMVFLLLGLQLPGILETSLMAAEIDPNVEIWMLFTNIILIYAALMLVRFGWLWTMKKFSNRFLKKKPMEFGSWTTREILIASFAGVRGAITLAGVLSIPLLLPDGNVFPARYELVFLAAGVILFSLFVGVVMLPILLQHIEVADHSQQLKEERIARAATAEVAIVAIQKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSVQEENLERRFRLAALRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEENQ
431110000000000000001310223000000000000000102201202011200000000000011013021320131021000000010000000100001100220200000000000011001000000232402330100010110111110000010000001122211100000100110000000000000000100200131123221010000000000010002200110000000000000111222312211211020011002100100000000010000022112223232112000000000000000000100100002100120233222322221121000000000100000000000222124232121210000000000000000111002100220322442332321210110002001200230133223323331022002200220111022323233324222323211220011003101210121242331133002201210112211123344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWPTFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGFLIYWVVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGLVSLKFAVAVAMGTMIFTVGGATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEPATQIVLLFLLPFASYLIAEHIGVSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWAMLEFVFNGMVFLLLGLQLPGILETSLMAAEIDPNVEIWMLFTNIILIYAALMLVRFGWLWTMKKFSNRFLKKKPMEFGSWTTREILIASFAGVRGAITLAGVLSIPLLLPDGNVFPARYELVFLAAGVILFSLFVGVVMLPILLQHIEVADHSQQLKEERIARAATAEVAIVAIQKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSVQEENLERRFRLAALRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEENQ
1	MUSTER	3m1iC	0.096	0.982	1.138	threading_1	IGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQNWPEFELSVNVCENNMIVLKLLSEEVFDFSAEQMTQAKALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYE----TNILELLST--KFMTSDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMVTADLKATYANANGNDQFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEERELFKTTLDYWHNLVADLFYKHIYEEICSQLRLVIIENMVRPEEVLVVESDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQ--IDGSEWSWHNINTLSWATMTEKRFVVTVIKDLLDLTVKKRGKDNKAVVASDYVVGQYPRFLK--FLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESEQTIIRDIQKTTPQQVHTFYKACGIIISEERSVAERNRLLSDLMQLPNMAWDTIVEQSTANPTLDSETVKIIANIIKTNVAVCTSMGA
2	SPARKS	3m1ic	0.090	0.967	0.939	threading_2	IGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWPQNWPEFSSSVNVCENNMIVLKLLSEEVFDFSAEQ----------------MTQAKALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLEYIYETNILELLST--KFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIAMPVTADLKATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEERELFKTTLDYWHNLVADLFYKHIYEEICSQLRLVIIENMVRPEEVLVKESDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVLDLTVKKRGKDNKAVVASDIMYVVYPRFLHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESEQTIIRDIQKTTPQQVHTFYKACGIIISEERSVAERNRLLSDLMQLPNMAWDTIVEQSTANPTLDSETVKIIANIIKTNVAVCTSMGA
3	PROSPECT2	1qgra	0.115	1.000	2.340	threading_3	MELFLVELSRVLAVAAGLQIKNSLTSKDPDIASQCVAGIACAEIPVNQWPELIPQLVMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMTNALLNSLEFTKANFDKESERHFIVVCEATQCPDTRVRVAALQKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHAKGALQYLVPILTQMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVLKPLVIQAMPTLIELMKDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGASNVCWAFSSLAEAAYVQKLLETTDRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLVQEDALMAVSTLVEVLGKPFLGIGLKNYAEYQVCLACRALQSNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHNQA
4	PPA-I	1b3uA	0.079	0.944	1.040	threading_4	STIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPELATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVAELRQYFRNLCSDDTPMVRRAAA------SKLGEFAKV---LELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAED---KSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLM-------KDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSD----ANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHV--------YAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDV
5	HHPRED-l	2l0e_A	0.194	0.056	2.101	threading_5	---------------------------------------------------------------------------------------------------------------KKKDNLLFGSIISAVDPVAVLAVFEEIHKKK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	HHPRED-g	2k3c_A	0.323	0.056	2.184	threading_6	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KSYMAYLSAELFHLSGIMALIASGVVMRPK-K--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	SP3	2hyda	0.099	0.880	1.378	threading_7	VKPYKYRIFATIIVGII--------KFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFV--------------IVRPPIEFIRQYLAQWTSNKILY----DIRKKLYNHLQA-LS----ARFYANNQV-GQVISRV-----INDVEQT-------KDFILTGLMNIWLDCITIIIALSIMFFLDLFIFPFYILTVYVFFGRLR---KLTRERSQALAEVQGFLHERV--QGISVVKSFAIEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI---TVGTLAAFVGYLELLFG-PLRRLVASFTTLTQSFASMDRDYDIKNGVGAQPIEI-----KQGRIDID---HVSFQYNDNEAIEKGETVFKSTLINLIPQILIDGHNIKDFTGSLRILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERG--VKLSGGQKQRLSIARIFL--NNPPEATSALDLESESIIQEALDVDRTTLIRLSENGHIVETTHRELIA-KQGAYEHLYSIQN
8	SAM-T99	2k3cA	0.345	0.053	1.107	threading_8	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YMAYLSAELFHLSGIMALIASGVVMRPKK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	1b3uA	0.089	0.940	1.065	threading_9	LNSIKKLSTIALALGVERTRSELLPFLTDTDEVLLALAEQLGTFTTLVG---GPE-YVHCLLPPLESLATVEETRDKAVESLRAISHE-HSPSDLEAHFVPLVKRLAGGDWFTSRTSACG-LFSVCYPRVSSAVKAEL---QYFRNLCSDD---TPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEWRVRYMVADKFTQKAVPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSACRENVIMSQILPCIKELVS----DANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWR------VRLAIIEYMPLLAGQLGVENSLCMAWLVDHV--------YAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAANVRFNVAKSLQKPILD---NSTLQSEVKPILEKLTQDQD
10	SPARKS	2xwub	0.102	0.967	0.880	threading_10	METSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQDDILSFEFRIYRVDISDTLMYVYEMELLSNLYDKLGRLLTSYSWQEALLYGFQSIAETIDV-------NYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWADHPVMINSVLPLVLHALGNPELSVSSVSTLKKICRECKYDLPPY-----AANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLPSNKLAIVHILGLLSNLFTTLDISHPNPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMQLCEMLGRMYSTIPQASALDLTRQLVHIFAHEPAHFPPIEALFLLVTSVTLTLFQQPDIVDSFMQLLALCERLDVKAVFQCAVLALAPTVKASCGFFTELLPRCGEVESVGKVVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFALNKHCFSLLSMWIKEALQPARLSPEQKDTFSQQI------LRERVN

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.564 to 3ea5B SCOP code=a.118.1.1	TM-score=0.875 to 1b3uA SCOP code=a.118.1.2	TM-score=0.557 to 1m8xA SCOP code=a.118.1.8	TM-score=0.599 to 1qgkA SCOP code=a.118.1.1	TM-score=0.881 to 1b3uA SCOP code=a.118.1.2