Template-based Modeling Results for YJBI_ECOLI

Submitted Primary Sequence

>Length 442
MKKIECACNFLMDKDAQGYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFRCRRLHNVIFIKASGECVDFSKNILDTVDFSQSQLGHSNFRECQIRNSNFDNCYLYASHFTRAEFLSAKEISFIKSNLTAVMFDYVRMSTGNFKDCITEQLELTIDYSDIFWNEDLDGYINNIIKMIDTLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKIFSHCPYIKDPIIRSYIHSDEDNKFDDFMRQHRFSEVNFDTQQMIDFINRFNTNKWLIDKNNNFFIQLIDQALRSTDDMIKANVWHLYKEWIRSDDVSPIFIETEDNLRTFNTNELTRNDNIFILFSSVDDGPVMVVSSQRLHDMLNPTKDTNWNSTYIYKSRHEMLPVNLTQETLFSSKSHGKYALFPIFTASWRAHRIMNKGV
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKIECACNFLMDKDAQGYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFRCRRLHNVIFIKASGECVDFSKNILDTVDFSQSQLGHSNFRECQIRNSNFDNCYLYASHFTRAEFLSAKEISFIKSNLTAVMFDYVRMSTGNFKDCITEQLELTIDYSDIFWNEDLDGYINNIIKMIDTLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKIFSHCPYIKDPIIRSYIHSDEDNKFDDFMRQHRFSEVNFDTQQMIDFINRFNTNKWLIDKNNNFFIQLIDQALRSTDDMIKANVWHLYKEWIRSDDVSPIFIETEDNLRTFNTNELTRNDNIFILFSSVDDGPVMVVSSQRLHDMLNPTKDTNWNSTYIYKSRHEMLPVNLTQETLFSSKSHGKYALFPIFTASWRAHRIMNKGV
CHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHCCCCCCCHHEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKIECACNFLMDKDAQGYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFRCRRLHNVIFIKASGECVDFSKNILDTVDFSQSQLGHSNFRECQIRNSNFDNCYLYASHFTRAEFLSAKEISFIKSNLTAVMFDYVRMSTGNFKDCITEQLELTIDYSDIFWNEDLDGYINNIIKMIDTLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKIFSHCPYIKDPIIRSYIHSDEDNKFDDFMRQHRFSEVNFDTQQMIDFINRFNTNKWLIDKNNNFFIQLIDQALRSTDDMIKANVWHLYKEWIRSDDVSPIFIETEDNLRTFNTNELTRNDNIFILFSSVDDGPVMVVSSQRLHDMLNPTKDTNWNSTYIYKSRHEMLPVNLTQETLFSSKSHGKYALFPIFTASWRAHRIMNKGV
4521102011000212112010120102102031010230102102033010310201102021010320102113021010230203102023010310202202012020220202202032020210202302022031011230202101032030220203301022020112101022121010001000311321232011110110120023031210102200220151023101131310110022012210210132221221311230011002102113200140121000001101321232012101300320031330111012122212212233113210000000114322100000210021001243121000000213331222211131012232323222000001002122123334
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKIECACNFLMDKDAQGYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFRCRRLHNVIFIKASGECVDFSKNILDTVDFSQSQLGHSNFRECQIRNSNFDNCYLYASHFTRAEFLSAKEISFIKSNLTAVMFDYVRMSTGNFKDCITEQLELTIDYSDIFWNEDLDGYINNIIKMIDTLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKIFSHCPYIKDPIIRSYIHSDEDNKFDDFMRQHRFSEVNFDTQQMIDFINRFNTNKWLIDKNNNFFIQLIDQALRSTDDMIKANVWHLYKEWIRSDDVSPIFIETEDNLRTFNTNELTRNDNIFILFSSVDDGPVMVVSSQRLHDMLNPTKDTNWNSTYIYKSRHEMLPVNLTQETLFSSKSHGKYALFPIFTASWRAHRIMNKGV
1	MUSTER	3nawA	0.193	0.959	2.284	threading_1	LSKAELTADIWLSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCII-RALFENSNFSNSNLKNASFKGSSYIQYP---PILNEADLTGAIIIPG--MVLSGAILGDVELFSEKSNTINLGGCYIDLSDIQENILSVLDNTKSNKSILLTMNTSDD---KYNHDKVRAAEELIKKISLDELAAFRVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIMYMENGSLLQAGMYFERHPGAMVSYNSSFIQIVMNGSRR--DGMQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSGDWDDDSAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSES-------FPIFSIPYHKAFSQNFGI
2	SPARKS	3nawa	0.188	0.964	7.822	threading_2	LSKAELTADIWLSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCII-RALFENSNFSNSNLKNASFKGSSYIQYP---PILNEADLTGAIII--PGMVLSGAILGDVELFSEKSNTINLGGCYIDLSDIQENISVLDNYTKSNKSILLTMNTSDDKYNHDKVRAAEELIKKISLDELAAFR-PYVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIMYMENGSLLQAGMYFERHPGAMVSYNSSFIQIVMNGSR--RDGMQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSPDWDDDSAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSES-------FPIFSIPYHKAFSQNFGI
3	PROSPECT2	3nawA	0.179	0.948	5.196	threading_3	LSKAETADLIWLSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCIFENSNFSNSNLKNASFKGSSYIQPILNEADLTGAIIPGMVLSGAILGDVK--ELFSEKSNTINLGGCYIDLSDIQENILSVLDNY------------TKSNKSILLTMNTSDDKYNHDKVRAAEELIKKISLDELAAFRVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIMYMENGSLLQAGMYFERHPGAMVSYNSSFIQIVMNGSRRDG--MQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSGKPDWDDAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSES-------FPIFSIPYHKAFSQNFGT
4	PPA-I	3nawA	0.174	0.948	4.273	threading_4	LSKAELTADIWLSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCLFENSNFSNSNLKNASFKGSSYIQYPLNEADLTGAIIPGMVLSGAILGDVK--ELFSEKSNTINLGGCYIDLSDIQENILSVLDNYTKSNK------------SILLTMNTSDDKYNHDKVRAAEELIKKISLDELAAPYVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIMYMENGSLLQAGMYFERHPGAMVSYNSSFIQIVMNGSRRDG--MQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSGDWDDDSAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSES-------FPIFSIPYHKAFSQNFVS
5	HHPRED-l	2qyu_A	0.177	0.934	8.363	threading_5	TSSPSSPADWKLTDAVLRQKAGETLTAADRDFSNADFRNITFSKIPPSFMERDGDIIKGFNFS-----NSKFTYSDISHLHFDECRFTYSTLSDVVCSNTKFSNSDMNEVFLQYSITTQ---QQPSFIDTTLKNTLIR-------HKANLSGVILNEPDNGGGNFI----RLGDIWLQMPLLWTENAVDGFLNSILMTIDSLPDKYSQEKVQAMEDLVKSLRGGRLTIRPVESSLVSVLAHPPYTQSALISEWLGPVQERFFAHQCQTYNDVPLPAQQRILPVLLDSFDRNSAAMTTHSGLFNQVILHCMTGVDDGTRQKAAALYEQYLAHPAVSPHIHNGLFG--NYDGSPDWTTRANFLLLSSQDSDTAMMLSTDTLLTMLNPTPDTAWDNFYLLRAGENVSTAQISPVELFRHD-------FPVFLAAFNQQATQRRF-
6	HHPRED-g	2qyu_A	0.168	0.930	5.360	threading_6	--ATSSPSPKKLTDAVLRQKAGETLTAADRDFSNADFRNITFSKIPPSFMERDGDIIKGFNFSNSK-----FTYSDISHLHFDECRFTYSTLSDVVCSNTKFSNSDMNEVFLQYSITTQ---QQPSFIDTTLKNTLIR------------HKANLSGVILNEPDNGDIWLQMPLLTENAVDFLNHE--HNNGKSILMTIDSLPDKYSQEKVQAMEDLVKSLRGGRLTIRPVESSLVSVLAHPPYTQSALISEWLGPVQERFFAHQCQTYNDVPLYYQQRILPVLLDSFDRNSAAMTTHSGLFNQVILHCMTGVTDGTRQKAAALYEQYLAHPAVSPHIHNGLFGNYDGSPDWTTRAADNFLLLSSQDSDTAMMLSTDTLLTMLNPTPDTAWDNFYLLRAGENVSTAQISPVELFRHD-------FPVFLAAFNQQATQRRFG
7	SP3	3nawa	0.188	0.964	7.227	threading_7	LSKAELTADIWLSANRTGEESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCII-RALFENSNFSNSNLKNASFKGSSYIQYP---PILNEADLTGAIIIPG--MVLSGAILGDVELFSEKSNTINLGGCYIDLSDIQENISVLDNYTKSNKSILLTMNTSDDKYNHDKVRAAEELIKKISLDELAAFR-PYVKMSLADSFSIHPYLNNANIQQWLEPICDDFFDTIMSWFNNSIMYMENGSLLQAGMYFERHPGAMVSYNSSFIQIVMNGSRR--DGMQERFRELYEVYLKNEKVYPVTQQSDFGLCDGSPDWDDDSAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQNTFGYSLSNLFSES-------FPIFSIPYHKAFSQNFGI
8	SAM-T99	3nawA	0.198	0.753	4.027	threading_8	---EESAEELNYSGCDLSGLSLVGLNLSSVNFSGAVLDDTDLRMSDLSQAVLENCSFKNSILNECNFCYANLSNCII----------------RALFENSNFSNSNLKNASFKGSILNEADLTGAIII------------PGMVLSGAILGDVK-------------------NLGGCYIDLSDIQSLADSFSIHPYLNNANIQQ-----------------------------------------------WLEPICDDFFDTIMSWFNNSIMMYMENGSLLQAGYFERHPGAMVSYNSSFIQIV--MNGSRRDGMQERFRELYEVYLKNEKVYPVTQQSDFGLCDGKPDWDDDLAYNWVLLSSQDDGMAMMCSLSHMVDMLSPNTSTNWMSFFLYKDGEVQ---NTFGYSLSNLFSE----SFPIFSIPYHKAFSQN---
9	MUSTER	2qyuA	0.143	0.964	2.009	threading_9	ADWAKKLTDAVLRQKA-------GETLTAADRDFSNADFRNITFSKILPPSF--MERDGDIIKGFNFSNSKFTYSDISHLHFDECRFTYSTLSDVVCSNTKFSNSDMNEVFLQYSITTQQQPSFIDTTLKNTLIRHKANLSGVILNEPDNSSPPSVSGGGNFIRLGDIWLQMPLLWAVDGFLNHEHNNGKSILMTIDSLPDKYSQEKVQAMEDLVKSLRGGRLTEACIRPVESSLVSVLAHPPYTQSALISEWLGPVQERFFAHQCQTYNDVPLPYQQRILPVLLDSFDRNSAAMTTHSGLFNQVILHCMTGVDDGTRQKAAALYEQYLAHPAVSPHIHNGLFGNYDGSPDWTTRAADNFLLLSSQDSDTAMMLSTDTLLTMLNPTPDTAWDNFYLLRAGENVSTAQISPVELFRHD-------FPVFLAAFNQQATQRREL
10	SPARKS	2qyua	0.165	0.959	6.794	threading_10	ADWAKKLTDAVLRQKAGETLTAADRDFSNADFRNITFSKILPPSFMEDGDIIKGFNFSNSKFTYSDISHLHFDECRFTYSTLSDVVCSNTKFSNSDMNEVFLQYSITTQ---QQPSFIDTTLKNTLIRKANLSGVILNEPDN---SSPPSVSGGGNFIRLGDIWLQMPLLWTENAVDGFLNHEHNNG-----KSILMTIDSLPDKYSQEKVQAMEDLVKSLRLTEACIRPVESSLVSVLAHPPYTQSALISEWLGPVQERFFAHQCQTYNAPDTYYQQRILPVLLDSFDRNSAAMTTHSGLFNQVILHCMTGVDDGTRQKAAALYEQYLAHPAVSPHIHNGLFGNYDGSPDWTTRAADNFLLLSSQDSDTAMMLSTDTLLTMLNPTPDTAWDNFYLLRAGENVSTAQISPVELFRHD-------FPVFLAAFNQQATQRREL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.578 to 2j8kA SCOP code=b.80.8.1	TM-score=0.582 to 2j8kA SCOP code=b.80.8.1	TM-score=0.578 to 2j8kA SCOP code=b.80.8.1	TM-score=0.548 to 2j8kA SCOP code=b.80.8.1	TM-score=0.544 to 2j8kA SCOP code=b.80.8.1