Template-based Modeling Results for YJBF_ECOLI

Submitted Primary Sequence

>Length 212
MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIVDGASWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDETPVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIVDGASWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDETPVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCEEEEEECCEEEEEECCCCCHHCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCEEEEEEEEEEEECCCCEEEEECCCEEEEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIVDGASWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDETPVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ
44200010000001101210330020011001223213103310340311000010221320000000023221100122200000120000100201311220322221211201212311100000011322201000010102232211020132302010021201223220101000134120100111012311102021022347
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIVDGASWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDETPVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ
1	MUSTER	2in5A	0.417	0.882	2.963	threading_1	------------------HSQQSVDTFRASLF---DNQVADQQIQALPY-STYLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTEKQWQNTFWVDSTGQVRQSRQL-GAGVIPVET-FLKPAPL
2	SPARKS	2in5a	0.417	0.882	3.882	threading_2	------------------HSQQSVDTFRASLFDN---QVADQQIQALPY-STYLRLNEGQRIFVVLGYIEQEQSKWLSQDN-ALVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTEKQWQNTFWVDSTGQVRQSRQ-LGAGVIPVET-FLKPAPL
3	PROSPECT2	2in5A	0.383	0.887	2.884	threading_3	HSQ------------------QSVDTFRASLF---DNQVADQQIQALPY-STYLRLNEGQRIFVVLGYIEQEQSKWLSQDN-ALVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTEKQWQNTFWVDSATGQVRQSRQLGAGVIPVE-TFLKPAPL
4	PPA-I	2in5A	0.417	0.882	5.730	threading_4	------------------HSQQSVDTFRASLFD---NQVADQQIQALPY-STYLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTEKQWQNTFWVDSTGQVRQSRQL-GAGVIPVET-FLKPAPL
5	HHPRED-l	2in5_A	0.414	0.877	11.597	threading_5	-----------------HSQQS-VDTFRASLFDNQ---VADQQIQALPYST-YLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTEKQWQNTFWVDSTGQVRQSRQ-LGAGVIPVE-TFLKPAP-
6	HHPRED-g	2in5_A	0.412	0.882	10.535	threading_6	-----------------HSQQS-VDTFRASLFDNQ---VADQQIQALPYST-YLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTEKQWQNTFWVDSTGQVRQSRQ-LGAGVIPVE-TFLKPAPL
7	SP3	2in5a	0.417	0.882	1.891	threading_7	------------------HSQQSVDTFRASLFD---NQVADQQIQALPY-STYLRLNEGQRIFVVLGYIEQEQSKWLSQDN-ALVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTEKQWQNTFWVDSTGQVRQSRQ-LGAGVIPVET-FLKPAPL
8	SAM-T99	2in5A	0.422	0.882	6.226	threading_8	------------------HSQQSVDTFRASLFDN---QVADQQIQALPY-STYLRLNEGQRIFVVLGYIEQEQSKWLSQDNA-LVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTEKQWQNTFWVDSTGQVRQSRQ-LGAGVIPVE-TFLKPAPL
9	MUSTER	3fosA	0.143	0.858	0.728	threading_9	HKQEASVLLNLHRNKINYLIGETARTSLSIAIDRPVDIKKQSILEKT--------FDSEPR-FSGLYFLNA----------------KGDVTAST--TELKTKVNLADRSFFIKAKETKKTVISDSYSSRITGQ--PIFTICVPVLDSKRNVTDYLVAAIQIDYLKNLINLLSPDVY-IEVVNQDGKIFASGQAHAEDQKPVDISWNKVYPN
10	SPARKS	3mh8a	0.162	0.844	0.690	threading_10	--------------GPLPDAKPLVEEATAQTKALKSAHMVNGKIPGLSLKTLSGDLTTNPTAATGNVKLTLGDADFVVFDGILYAT---------LTPNQWSDFGPAADDPAQVLNPDTGLANVLA--------NFADAKAEGRDTINGQNTIRI-SGKVSAQAVNQIAFNATQPVPATVWIQETGQLAQAQLDRGSG-NSVQMTLSKWGEK

Predicted Tertiary Structure


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TM-score=0.898 to 2in5A SCOP code=b.177.1.1	TM-score=0.899 to 2in5A SCOP code=b.177.1.1	TM-score=0.901 to 2in5A SCOP code=b.177.1.1	TM-score=0.897 to 2in5A SCOP code=b.177.1.1	TM-score=0.899 to 2in5A SCOP code=b.177.1.1