Template-based Modeling Results for YJAH_ECOLI

Submitted Primary Sequence

>Length 231
MNSFNEGVVSPLLSFWRRSLMLAGALLLTACSHNSSLPPFTASGFAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKPPVNIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQGRWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVANSDFCRWQPNEKTF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNSFNEGVVSPLLSFWRRSLMLAGALLLTACSHNSSLPPFTASGFAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKPPVNIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQGRWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVANSDFCRWQPNEKTF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEECCEEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNSFNEGVVSPLLSFWRRSLMLAGALLLTACSHNSSLPPFTASGFAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKPPVNIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQGRWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVANSDFCRWQPNEKTF
553223221100000011000000000010013212123021211012300000012222331100000011433201011010223100101021234332202010145230000011023222312331021021102202200211432211011011232321021030121213132301110231323131301000021231210000132210222244434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNSFNEGVVSPLLSFWRRSLMLAGALLLTACSHNSSLPPFTASGFAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKPPVNIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQGRWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVANSDFCRWQPNEKTF
1	PROSPECT2	2dnja	0.118	0.844	1.085	threading_1	LKGETKMSNATLASYIVRIVRVAVGKLLDYLNQDDP-----------NTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDD--------SFSREPAVVKFSSHSTKVKEFAI-----VALHSAPSDAVAEINSLYDVYLDVQQKWHLNDVMLMGDFNADCS------------YVTSSQWSSIRLRTSSTPDSADTTATSTNCAYDRIVVAGSLLSVVPGSAAPF
2	PPA-I	2hzqA	0.087	0.693	1.211	threading_2	-------------------------FHLGKCPNPPVQENFDVNKYPGRWYEIEKIPTTFENGRCIQANYSLENGKIKVLNQELRADGTVNQIEGEANLTEPAKLEVKFSWFPSAPYHILATDY----------------------------ENYALVYSCTSISQSFHVDFAWILARNVALPPETVDSLKNILTSNNIDVKKTVTDQVNCPKL------------------
3	PROSPECT2	1vybA	0.066	0.848	1.065	threading_3	GSNSHNGLNSA--IKRHRLASWIKSQCIQETHLTCRDTHRLKI-----KGWRKIYQANGKQKKAGVAILVSDKTDFKPTKIKRDKEGHYIMVKGSIQQEELTILNIYAPNTG-----------------------APRFIKQVLSDLQRDLDSHTLIM-GDFNTPLSTLDRSTR----QKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSITNYLSDHS
4	PPA-I	1ew3A	0.071	0.667	1.128	threading_4	---------------------------------VADISKISGEWYSIFLASDVKEKIEENGSRVFVDVIRALDNSSLYAEYQTKVNGECTEFPMVFD-KTEEDGVYSLNYDGYNVFRISEFEN-----------------------------DEHIILYLVNFDKDRPFQLFEFYAREPDVSPEIKEEFVKIVQKRGIVK----------ENIIDLTKIDRC---FQLRG-
5	PROSPECT2	2azpA	0.091	1.000	1.064	threading_5	IGGFPDLGQGDMAERRRLLGERHDAWRAACILEPRGSDVFNNSGYLGMCGLVASLAHLGRIGPGVHRIETPVGEVEATLHEVSVRNVPAYRYRRQVEVPGIGRVSGDIAWGGNWFFLVAGHGQRLAGDNLDALTAYTVAVQQALDDQDIRGEDGGAHIELFADDPHADSRNFGKAYDRSPCGTGTSAKLAAADGKLLPGQPWRQASVIGSQEWLDGQPGGPIVPTPFAWGI
6	PPA-I	1gm6A	0.078	0.662	1.051	threading_6	-------------------------------VVTSNFDASKIAGLLASDAKENI--EENGSMRVFVEHIRVLDNSSLAFKFQRKVNGECTDFYAVCDKVGDGVYTVAYYGENKFRLLEVNYSDYV-----------------------------ILHLVDVNGDKTFQLMEFYGR--KPDVEPKLKDKFVEICQQYGIIK----------ENIIDLTKIDRC---FQLRG-
7	PROSPECT2	2hzqA	0.094	0.693	1.064	threading_7	FH-------------------------LGKCPNPPVQENFDVNKYPGRWYEIEKIPTTFENGRCIQANYSLENGKIKVLNQELRADGTVNQIETPVNLTEPAKLEVKFSWFPSAPYHILATDY----------------------------ENYALVYSCTSISQSFHVDFAWILARNVALPPETVDSLKNILTSNNID------------------VKKTVTDQVNCPKL
8	PROSPECT2	1gkab	0.107	0.727	1.016	threading_8	DGI--PSFVTA-----------------GKCASVANQDNFDLRRYAGRWYQTHIIENAYQPVTRCIHSNYEYSTNDKVTTAGFNPNDEYLKIDYPTKEFPAAHMLIDAPSVFAAPYEVIETDY-----------------------------ETYSCVYSCITTDNYKSEFAFVFSRTPQTSGPAVEKTAAVFNKNGVEF----------SKFVPVSHTAECVYRA-----
9	MUSTER	3flpN	0.111	0.861	0.754	threading_9	VD--IRD---VKISFPGT-----KFPHLRFMQTLPAVRQLTVCPFHRNTGYIFSCATSNQDNQFITSMYVKSDGTLNLGLQVNASSNKYISCPIEIELGQWYHVCHVWSVDGRMAVYA-SPCGTMENVGKG----HQISAGGTVVIGQEQDKIG-----GGFEEQESELSD---QVWDEALTTHQVSTVASCNGIRPRGNVISWMEDADDG--VIVGISHMC-------SL
10	SPARKS	2jjqa	0.120	0.905	0.690	threading_10	IDECFGKTSREAIERLKEFIEE---------EKISVWNIKKDEG-----FLRYMVLREGKFTEEVMVNFVTKEGNLPDPTNYFDFDSIYWSVNRSKSDVSYGDIERFWGKE----FIRERLDDVDYLIHPNSFQTNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRGNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVS----VKGFDTVIVDPPRAGL

Predicted Tertiary Structure


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TM-score=0.719 to 2a41B SCOP code=d.151.1.1	TM-score=0.711 to 1gkaB SCOP code=b.60.1.1	TM-score=0.661 to 1akoA SCOP code=d.151.1.1	TM-score=0.792 to 1ew3A SCOP code=b.60.1.1	TM-score=0.631 to 2gkjA SCOP code=d.21.1.1