Template-based Modeling Results for YJAG_ECOLI

Submitted Primary Sequence

>Length 196
MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGDGQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVALSELVHSRLSGETLEHAVEVSKTSITTVAMLEMTQAGREMSDEELKENPAVEQEWDIQWEIFRLLAECEERDIELIKGLRADLREAGESNIGIIFQQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGDGQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVALSELVHSRLSGETLEHAVEVSKTSITTVAMLEMTQAGREMSDEELKENPAVEQEWDIQWEIFRLLAECEERDIELIKGLRADLREAGESNIGIIFQQ
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGDGQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVALSELVHSRLSGETLEHAVEVSKTSITTVAMLEMTQAGREMSDEELKENPAVEQEWDIQWEIFRLLAECEERDIELIKGLRADLREAGESNIGIIFQQ
5531312130350321110000000022001101000110212202002200100020022331312031003102510221331101000000000100020010101232232013003101200120121222431233103302112211200220020023033332300210122044111020102234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGDGQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVALSELVHSRLSGETLEHAVEVSKTSITTVAMLEMTQAGREMSDEELKENPAVEQEWDIQWEIFRLLAECEERDIELIKGLRADLREAGESNIGIIFQQ
1	MUSTER	2q9rA	0.365	0.964	3.419	threading_1	--KTGFFKRLKALTLPQKQLFATALCQRL-PNYQLFSEVCEFGDPAVLSTALELLWQSLYDPKLKFNIDVHLQRLEDNTPEPADFEAYGVYPA-DAVVAISTLLGAIQGK-IEEDIVNISKLSSSTVANYIEAISDVDLVDEALDDFHEVEEEKELQNSLLEIIEENPKITAELVKGLRKDIIETGVSNIGISV--
2	SPARKS	3f7ca	0.298	0.974	3.406	threading_2	GNANQFLKAVSQLQGWRECAFLLALAERSFPNYALFADAVGLKTGG-KRQLLDLAWD-LQKDVADAAIPQLLSKLETLCPNVDEYDAYGVYPAFDFCQLLEQALLNRLNPNK-HRATEASQLATRTVDFVESEGEGDENLVRVFEHHPLLKDDKLFQRDTVALYYYRTPK-EAFLAELRAGAANDGVSNLGISLE-
3	PROSPECT2	2q9rA	0.365	0.964	2.804	threading_3	--KTGFFKRLKALTLPQKQLFATALCQRL-PNYQLFSEVCEFGDPAVLSTALELLWQSLYDPKLKFNIDVHLQRLEDNTPEPADFEAYGVYPA-DAVVAISTLLGAIQG-KIEEDIVNISKLSSSTVANYIEAISDVDLVDEALDDFVFVEEEKELQNSLLEIIEENPKITAELVKGLRKDIIETGVSNIGISV--
4	PPA-I	2q9rA	0.360	0.964	5.511	threading_4	--KTGFFKRLKALTLPQKQLFATALCQRL-PNYQLFSEVCEFGDPAVLSTALELLWQSLYDPKLKFNIDVHLQRLEDNTPEPADFEAYGVYPA-DAVVAISTLLGAIQGK-IEEDIVNISKLSSSTVANYIEAISDVDLVDEALDDFVFAEEEKELQNSLLEIIEENPKITAELVKGLRKDIIETGVSNIGISV--
5	HHPRED-l	3f7c_A	0.305	0.954	9.567	threading_5	-NANQFLKAVSQLQGWRECAFLLALAERSFPNYALFADAVGLKTGGK-RQLLDLAWD-LQKDVADAAIPQLLSKLETLCPNVDEYDAYGVYPAFDFCQLLEQALLNRLNPNKH-RATEASQLATRTV-DFVE-SEGEG-DENELEHHPLLKDDKLFQRDTV-ALYYYRTPKEAFLAELRAGAANDGVSNLGISLE-
6	HHPRED-g	3f7c_A	0.305	0.954	8.086	threading_6	-NANQFLKAVSQLQGWRECAFLLALAERSFPNYALFADAVGLKTGGK-RQLLDLAWD-LQKDVADAAIPQLLSKLETLCPNVDEYDAYGVYPAFDFCQLLEQALLNRLNPNKH-RATEASQLATRTV-DFVE-SEGEG-DENELEHHPLLKDDKLFQRDTV-ALYYYRTPKEAFLAELRAGAANDGVSNLGISLE-
7	SP3	3f7ca	0.298	0.974	2.175	threading_7	GNANQFLKAVSQLQGWRECAFLLALAERSFPNYALFADAVGLKTGG-KRQLLDLAWD-LQKDVADAAIPQLLSKLETLCPNVDEYDAYGVYPAFDFCQLLEQALLNRLNPNK-HRATEASQLATRTVDFVESEGEGDENLVRVFEHHPLLKDDKLFQRDTVALYYYRTPK-EAFLAELRAGAANDGVSNLGISLE-
8	SAM-T99	2q9rA	0.370	0.964	7.106	threading_8	--KTGFFKRLKALTLPQKQLFATALCQR-LPNYQLFSEVCEFGDPAVLSTALELLWQSLYDPKLKFNIDVHLQRLEDNTPEPADFEAYGVYPA-DAVVAISTLLGAIQ-GKIEEDIVNISKLSSSTVANYIEAISDVDLVDEALDDAHEVEEEKELQNSLLEIIEENPKITAELVKGLRKDIIETGVSNIGISV--
9	MUSTER	3f7cA	0.293	0.974	3.099	threading_9	GNANQFLKAVSQLQGWRECAFLLALAERSFPNYALFADAVGLKTGGK-RQLLDLAWDL-QKDVADAAIPQLLSKLETLCPNVDEYDAYGVYPAFDFCQLLEQALLNRLNPNK-HRATEASQLATRTVDFVESEGEGDENEVRVFEHHPLLKDDKLFQRDTVALYYYRTP-KEAFLAELRAGAANDGVSNLGISLE-
10	SPARKS	2i0ma	0.119	0.898	0.628	threading_10	----QFDLELHEL--EQSFLGLGQLVLET---ASKALLALASKDKEMAELIINK--------DHAINQSAIELTCARLLPQVSDLRFVILERMGDHMAGIAKAVLQLKENQLEEQLHQMGKLSLSMLADLLVAFPLHQA-SKAISIAQKDEQIDQYYYALSKEIIGLMKESIPNGTQYLYIIGH--LERFAANICE

Predicted Tertiary Structure


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TM-score=0.496 to 2qgmA SCOP code=c.150.1.3	TM-score=0.497 to 2qgmA SCOP code=c.150.1.3	TM-score=0.499 to 3b55A SCOP code=c.150.1.3	TM-score=0.497 to 2qgmA SCOP code=c.150.1.3	TM-score=0.498 to 2qgmA SCOP code=c.150.1.3