Template-based Modeling Results for YIIM_ECOLI

Submitted Primary Sequence

>Length 224
MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQAEKKVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQAEKKVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGK
CCCEEEEEECCCEECCCCCCCCEECCCCCCEEEECCCCCCCCEECCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHCCCCCEEEECCEEEEEECCCCCCHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCEECCCCEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQAEKKVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGK
54100000003022113133220122313120001411031112013322121220000002100220042033312212111102000021012220110110100300010022323013012203213002001211210000000130202230201001112301021000001123222310120020220032003102312321323312422324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQAEKKVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGK
1	MUSTER	1o67A	0.878	0.915	3.417	threading_1	-------FLVEREQYPVDVYTGKAKIQVDG-ELLTELGLEGD-------EGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNV-YGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIA-QLQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWH-PFDDDQYHRLLSAAGLSKSWTRTQKRRLS-GKIEDFSRRLWGK
2	SPARKS	1o65a	0.925	0.955	5.864	threading_2	VER-------EQMRYPVDVYTGKAKIQVDGELMLTELGLEGD---EQAVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGK
3	PROSPECT2	1o65A	0.917	0.969	4.100	threading_3	KF----LVEREQMRYPVDVYTGKAKIQVDGELMLTELGLEGDEQA---VHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGE
4	PPA-I	1o67A	0.874	0.920	6.293	threading_4	------FLVEREQRYPVDVYTGKAKIQVDG-ELLTELGLEGD-------EGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNV-YGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIA-QLQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWHP-FDDDQYHRLLSAAGLSKSWTRTQKRRLS-GKIEDFSRRLWGK
5	HHPRED-l	1o65_A	1.000	0.929	11.459	threading_5	MRYPVDVYTGK------------AKIQVDGELMLTELGLEGDEQA---VHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWG-
6	HHPRED-g	1o65_A	1.000	0.933	10.468	threading_6	MRYPVDVYTGK------------AKIQVDGELMLTELGLEGDEQA---VHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGK
7	SP3	1o65a	0.935	0.955	5.893	threading_7	VER-------EQMRYPVDVYTGKAKIQVDGELMLTELGLEGDEQA---VHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGK
8	SAM-T99	1o67A	0.893	0.920	7.722	threading_8	------FLVEREQRYPVDVYTGKAKIQVDG-ELLTELGLEGDE-------GGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVY-GDIFRWGEALIQVSQPRSPCYKLNYHFDISDIAQL-QNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWHPF-DDDQYHRLLSAAGLSKSWTRTQKRRL-SGKIEDFSRRLWGK
9	MUSTER	1oruA	0.174	0.692	1.465	threading_9	WKR-----TAKAEGLYIADTKSFVTKQ--DKLDFDYGGIPGDLHFREPFSRGTRRQISIVSIEECNEIALK----VPRILPEWLGANVAVSGPDLTSLKEGSRIIFPSAALLCEGENDPCIQPGEVIQQPKLASAFVRHGIRGIVCIVERPGAVYTGDEIEVHSYQ----------------------------------------------------------
10	SPARKS	1orua	0.167	0.696	1.172	threading_10	-----WKRTAKAEGLYIADTK--SFVTKQDKLDFDYGGIPGDLHFGLTKKAGNRRQISIVSIEECNEIAL---KGVPRILPEWLGANVAVSGPDLTSLKEGSRIIFPSAALLCEGENDPCIQPGEVIQQPKLASAFVRLGIRGIVCIVERPGAVYTGDEIEVHSYQ----------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.934 to 1o67A TM-score=0.965 to native SCOP code=b.58.1.2	TM-score=0.941 to 1o67A TM-score=0.963 to native SCOP code=b.58.1.2	TM-score=0.939 to 1o67A TM-score=0.992 to native SCOP code=b.58.1.2	TM-score=0.947 to 1o67A TM-score=0.996 to native SCOP code=b.58.1.2	TM-score=0.940 to 1o67A TM-score=0.963 to native SCOP code=b.58.1.2

Experimental Structure

Download 1o65A

SCOP code=b.58.1.2