Template-based Modeling Results for YIIG_ECOLI

Submitted Primary Sequence

>Length 351
MKRNLLSSAIIVAIMSLGLTGCDDKKAETETLPPANSQPAAPAPEAKPTEAPVAKAEAKPETPAQPVVDEQAVFDEKMDVYIKCYNKLQIPVQRSLARYADWLKDFKQGPTGEERTVYGIYGISESNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNTINEMDKYYTQENYKDDAFAKGKTLHQTFLKNLEAFEPVAESYHAAIQEINDKRQLAELKNIEEREGKTFHYYSLAVMISAKQINNLISQDKFDAEAAMKKVSELETLVAQAKEADKGGMNFSFINSAGQYQLEAKKYVRRIRDKVPYSDWDKEQLQDANSSWMVEDSFPRALREYNEMVDDYNSLR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRNLLSSAIIVAIMSLGLTGCDDKKAETETLPPANSQPAAPAPEAKPTEAPVAKAEAKPETPAQPVVDEQAVFDEKMDVYIKCYNKLQIPVQRSLARYADWLKDFKQGPTGEERTVYGIYGISESNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNTINEMDKYYTQENYKDDAFAKGKTLHQTFLKNLEAFEPVAESYHAAIQEINDKRQLAELKNIEEREGKTFHYYSLAVMISAKQINNLISQDKFDAEAAMKKVSELETLVAQAKEADKGGMNFSFINSAGQYQLEAKKYVRRIRDKVPYSDWDKEQLQDANSSWMVEDSFPRALREYNEMVDDYNSLR
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRNLLSSAIIVAIMSLGLTGCDDKKAETETLPPANSQPAAPAPEAKPTEAPVAKAEAKPETPAQPVVDEQAVFDEKMDVYIKCYNKLQIPVQRSLARYADWLKDFKQGPTGEERTVYGIYGISESNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNTINEMDKYYTQENYKDDAFAKGKTLHQTFLKNLEAFEPVAESYHAAIQEINDKRQLAELKNIEEREGKTFHYYSLAVMISAKQINNLISQDKFDAEAAMKKVSELETLVAQAKEADKGGMNFSFINSAGQYQLEAKKYVRRIRDKVPYSDWDKEQLQDANSSWMVEDSFPRALREYNEMVDDYNSLR
543300000000000000010133331322223323222223133243232322323233323233223322201310110030012002101300220020022133133133311201120131002201210221132232233012002200300220030022004112333133111110220042004003202300210220022112321221033124432310100000001002200211233311131013101202200220341332211111111012011202200320343232132232113213211223311220031012002222224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKRNLLSSAIIVAIMSLGLTGCDDKKAETETLPPANSQPAAPAPEAKPTEAPVAKAEAKPETPAQPVVDEQAVFDEKMDVYIKCYNKLQIPVQRSLARYADWLKDFKQGPTGEERTVYGIYGISESNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNTINEMDKYYTQENYKDDAFAKGKTLHQTFLKNLEAFEPVAESYHAAIQEINDKRQLAELKNIEEREGKTFHYYSLAVMISAKQINNLISQDKFDAEAAMKKVSELETLVAQAKEADKGGMNFSFINSAGQYQLEAKKYVRRIRDKVPYSDWDKEQLQDANSSWMVEDSFPRALREYNEMVDDYNSLR
1	PROSPECT2	2uy1A	0.078	0.980	1.384	threading_1	SSPSAIMEHALESLFGRCLKKSYNLDLWMLYIEYVRKVSKLYEVGQFENYWDSYGLYKEYIEEEGKIEDEQTRIEKIRNGYKKIVGDTLPIFQSSFQRYQQIQPLIRGWSVIDLEMENGMKLGGRPHESRMHFIHNYILDSFYYAEEVYFFYSEYLIGKEKAKKVVERGIEMSDGMFLVMDEEAVYGDLKRKYSFSKELDLLRINHLNYVLKKRGLELFRKLFIELGNEGVGPHVFIYCAFIEYYATFSSGLLKHPDSTLLKEEFFLFLLRIENARALFKRLEKTSRMWDSMIEYMELFRELVDQKMDAIKADA-------ILPPLPPRNVQMEGILGRYHCFLDSFNFLD
2	HHPRED-l	3iee_A	0.123	0.650	2.378	threading_2	---------------------------------------------------------------------VSTADIENAAEVIKYYNTLKEKDVNAVLDY----EQK--GKTPALSAIV-PPAVVSKDSA-------IVL-NPGNFNNLKQNYTGLFQARTEFYANFDTYLSYLKKKDV-----TNAKKLLDVNYQLSTQ-SEYKQNIFDILSPFTEQAELVLLVDNPLK--AQI--SVRK-S---QSILNLYARKR-DGPRIDLKVAELTKQLDAAKKLPVVNGHEGE-KSYQAFLSQVETFIKQVKK----------VRE--------KGEYSD--ADYD-LTSAFE-T-
3	HHPRED-g	3iee_A	0.093	0.672	2.422	threading_3	---------------------------------------------V-----------------STADIENAAEVIKYYNTSLGVLKD-KEKDV---NAVLDY-E--QKGKTPALSAIVPP-AVVSKD-------SAIVLNPGNCRRNLKQNYTGLFQARTEFYANFDTYLSYLKKKDV-----TNAKKLLDVNYQLSTQ-SEYKQNIFDILSPFTEQAELVLLVDNPLKAQI-S---VRK-S---QSILNLYARKH-DGPRIDLKVAELTKQLDAAKKLPVVNGHEGE-KSYQAFLSQVETFIKQVKKV----------RE--------KGEYSD--ADYD-LTSAFE-TS
4	PROSPECT2	1w63A	0.069	0.989	1.371	threading_4	MRCRNVAKLLYMGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGIGRNDDDSSEAMNDILAQVANTETSKNVGNAILYETVLTIMDRVLAINILGRFLLNND-KNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFAVNGNNIRGMMKELLYFASGIFLAAEKYAPSKRWH---IDTIMRVLTTAGSYVRDDAVPNLIQLITNHAYTVQRLYKAILGDYSQQPLVQVAAWQCEEEEPIQVTEDEVLDILESIMKLSTRFK
5	HHPRED-l	3rh3_A	0.129	0.595	2.377	threading_5	-----------------------------------------------------------------------TEELDDASKVINYYH-LAVLRHVANAKDINAVLGYQTG----------------TFNPEVRQNL-------------KQNYAGLFNVRTQFYDNFNKFLAYKKSKDT--AKTAQLLDENYKLSVELSEYKQV---IFDILSPLTEQAESELLADEPLKD--QI-------SGTVQSI-NLYSRKA-DGVRIDLK-AELEKELKAAEKIPAVTGYDEELKNFQSFLSTVKSF-ND-QK----------ARS--------KGAYSD--KEYQA-SEAYESV-
6	HHPRED-g	3rh3_A	0.119	0.598	2.342	threading_6	-----------------------------------------------------------------------TEELDDASKVINYYH-SLAVLAKDINAVLGY-E--QTG-------------------------TAE-LLDPGDRQNLKQNYAGLFNVRTQFYDNFNKFLAYKKSKDT--AKTAQLLDENYKLSVELSEYKQV---IFDILSPLTEQAESELLADEPLKDQI---------SGTVQSI-NLYSRKA-DGVRIDLK-AELEKELKAAEKIPAVTGYDEELKNFQSFLSTVKSF-ND-QKA----------RS--------KGAYSD--KEYQA-SEAYESVI
7	PROSPECT2	1u4qA	0.092	0.835	1.358	threading_7	ANKQNFNTGIKDFDFWLS-----------------------------------EVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQ----ADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARR------AKLNESHRQFFRDMDDEESWIKEKKLLVSSEDYGRDGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDEEIQQRLAQFVDHWKELKQLAAGQRLEESLEYQQFVA----NVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVND---VCANGEDLIKKNNH------HVENITAKMKGLKGKVSDLE
8	PROSPECT2	1ee4a	0.075	0.989	1.357	threading_8	QELPQMTQQLATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDW-SVVSQALPTLAKLTETLVDACWAISYLSDGPQEAIQAVIDTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNTEQIQAVIDANLAEDKTKKEACWAISNASSGGLQRPDIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKQQNENDKIYEKAYKIIETY---F
9	PROSPECT2	1ejlI	0.100	0.994	1.350	threading_9	LESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLADSCWAISYLTDGPNVKKGVVPQLVKLLPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNQDQIQQVVNHGKADFKTQKEAAWAITNYTSGIVYLVHCGIIEPLMNLLSQVILDAISNIFQAAEKLGETEKLSIMIEECGGEALQRHENESVYKASLNLIEKY--FS
10	MUSTER	2r02A2	0.112	0.889	0.821	threading_10	RKADLVNRSIAQMREATTLA---NGVLASLNLPAAIEDVSGDTVPQS-----TKSRSVIEQGGIQTVDQLIKELPELLQRNREILDESLRLLDEEEATDNDLRAKFKERWQRTPSNE--LYKPLRAEGTNFRTVLDKAVQ---ADGQVKECYQSHRDTIVLLCKPEPELNAAISANPAKTMQGSEVVNVLKSLLSNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVNEEALSVTELDRVYGGLTTKVQE---SLKKQEGLLKNIQVSHQEFSKMKQSN----------NEANLREEVLKNLA---TAYDNFVELVAN----------LKEGTKFYNELTEILVRFQ

Predicted Tertiary Structure


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TM-score=0.524 to 2ooeA SCOP code=a.118.8.7	TM-score=0.498 to 1j30A SCOP code=a.25.1.1	TM-score=0.498 to 1j30A SCOP code=a.25.1.1	TM-score=0.619 to 1w63C SCOP code=i.23.1.1	TM-score=0.488 to 1j30A SCOP code=a.25.1.1