Template-based Modeling Results for YIHW_ECOLI

Submitted Primary Sequence

>Length 261
MSLTELTGNPRHDQLLMLIAERGYMNIDELANLLDVSTQTVRRDIRKLSEQGLITRHHGGAGRASSVVNTAFEQREVSQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNHNHLRIITNSLRVAHILYHNPRFEVMVPGGTLRSHNSGIIGPSAASFVADFRADYLVTSVGAIESDGALMEFDVNEANVVKTMMAHARNILLVADHTKYHASAAVEIGNVAQVTALFTDELPPAALKSRLQDSQIEIILPQEDA
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSLTELTGNPRHDQLLMLIAERGYMNIDELANLLDVSTQTVRRDIRKLSEQGLITRHHGGAGRASSVVNTAFEQREVSQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNHNHLRIITNSLRVAHILYHNPRFEVMVPGGTLRSHNSGIIGPSAASFVADFRADYLVTSVGAIESDGALMEFDVNEANVVKTMMAHARNILLVADHTKYHASAAVEIGNVAQVTALFTDELPPAALKSRLQDSQIEIILPQEDA
CCCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCEEEEECCEEECCCCCEECHHHHHHHHCCCCCEEEEECCEECCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCCCCCCEEEEEECCHHHCCEEEECCCCCHHHHHHHHHCCCEEEEECCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSLTELTGNPRHDQLLMLIAERGYMNIDELANLLDVSTQTVRRDIRKLSEQGLITRHHGGAGRASSVVNTAFEQREVSQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNHNHLRIITNSLRVAHILYHNPRFEVMVPGGTLRSHNSGIIGPSAASFVADFRADYLVTSVGAIESDGALMEFDVNEANVVKTMMAHARNILLVADHTKYHASAAVEIGNVAQVTALFTDELPPAALKSRLQDSQIEIILPQEDA
552332213201220021025322020320043031113102200320252110010110001122222221322331213113000200031033110000100000110021024233010000002001101423301000010201233200002000100220200000000100113110021112101002100220300000013131212000100302201000013202220122034141100102345
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSLTELTGNPRHDQLLMLIAERGYMNIDELANLLDVSTQTVRRDIRKLSEQGLITRHHGGAGRASSVVNTAFEQREVSQTEEKKAIAEAVADYIPDGSTIFITIGTTVEHVARALLNHNHLRIITNSLRVAHILYHNPRFEVMVPGGTLRSHNSGIIGPSAASFVADFRADYLVTSVGAIESDGALMEFDVNEANVVKTMMAHARNILLVADHTKYHASAAVEIGNVAQVTALFTDELPPAALKSRLQDSQIEIILPQEDA
1	SPARKS	2w48a	0.152	0.885	1.302	threading_1	-----SDDIRLIVKIAQLYYEQD-MTQAQIARELGIYRTTISRLLKRGREQGIVT-----IAINYDYNENLWLEQQLKQKEQLSAMGQHGALLVEPGDIIGFSWGRAVRSLVENLPQRRQVICVPHVNTLTYGAAARDSLDVALVGGSPAIRDGAFYGSEESDDLNARHV-AGDICSRFYDINGGLVDTNMSELSIEMAKLRQARYSIGIAGEEK--YSGILGALHGRYINCLVTN----RETAELLLK------------
2	PROSPECT2	2w48A	0.123	0.969	1.745	threading_2	SD------DIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTIAINYDYNENLWLEQQLKQKFGLEEEQLSAMGQHGALLLEPGDIIGFSWGRAVRSLVENLPQSRQVICVPHVNTLTYGAAARLKAESHLADFPALLDNPLIRSQHFKTISSYWDLDVALVGIGSPAIRDGANWHAFYGSEESDDLNA--RHVAGDIGLVDTNMSEKTLSIEMAKARYSIMGEEKYSGILGALHGRYINCLVTNRET
3	PPA-I	1uj5A	0.178	0.602	1.434	threading_3	----------------------------------------------------------------------------RPLESYKKEAAHAAIAYVQDGMVVGLGTGSTARYAVLELAELKGVVGVPTSRATEELAKRE--------GIPLVDLPPE-------------GVDLAIDGADEIAPGLALIKGMGGALLREKIVERVAKEFIVIADHTKKVP-------VLGRGPPVEIVPFGYRATLKAIADLGGEPELRMDGD
4	SAM-T99	1i1gA1	0.235	0.195	1.265	threading_4	-------IDERDKIILEILEKDARTPFTEIAKKLGISETAVRKRVKALEEKGIIEGYT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	HHPRED-l	3rrl_B	0.141	0.625	3.475	threading_5	----------------------------------------------------------------------------------REAIIKRAAKELKEG-YVNLGIGLPT-LVANEVS-G-NIVFQSENGLLGYPLEGSVDADLINAGKEVVPGASFFNSADSFA-IRGGHIDLAILGG-EVSQNGDLANW-IPKKLIK-DLVHGAKKVIVI-EHCNKGESKVKKECSLGVVHQLITDLAVFEF-----SNNA-KLVELQEG-
6	SP3	2w48a	0.124	0.958	1.044	threading_6	------SDDIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIV-TIA----INYDYNENLWLEQQLKQKEQLSAMGQHGALLVEPGDIIGFSWGRAVRSLVENLPQRRQVICVPHVNTLTYGAAARLKAESHLADFPALLDNNGIMQSQHFKTISSYSLDVALVGIGSPAIRDGANWHAFYGSEESDDLNARCSRFYGLVDTNMSEKTLSIEMAKLRQARYSIGGEEKYSGILGALHGRYINCLVTNRET
7	HHPRED-g	3rrl_B	0.145	0.632	3.269	threading_7	----------------------------------------------------------------------------------REAIIKRAAKELKEG-YVNLGIGLPT-LVANEVS-G-NIVFQSENGLLGYPLEGSVDADLINAGKEVVPGASFFNSADSFA-IRGGHIDLAILGG-EVSQNGDLANW-IPKKLIK-DLVHGAKKVIVI-EHCNKGESKVKKECSLGVVHQLITDLAVFESLDQVKEEAEFEVRL-----
8	PROSPECT2	1bia_	0.139	0.801	1.377	threading_8	MKDN-----TVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVVFTVPGKGYSLPEPIQLLNAKQILGQ--------------LDGGSVAVLPVIDSTNQYLLIGELKSGDACIAEYIVMAEVLRKLGADKVRVKWNDLYLQDRKLAG-----ILVELTGAAQIVIGAGINMAMWITLQETLAAMLIRELRAALELF----------------------------EQEGLAPYLSRWEKINRPVKLIIGDR
9	SP3	1ks2a1	0.191	0.521	1.125	threading_9	-----------------------------------------------------------------------------TQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTGQIEGAVSSSDASTEKLKSL-GIHVF--------------------DLNEVSLGIYVDGADEINGH--QIKGGGAALTREKIIASVAEKFICIADASKQ-------------VDIL-ANRGAD-----------VALIGTPDGV
10	MUSTER	2w48B	0.143	0.939	0.817	threading_10	----NSDDIRLIVKIAQLYYEQD-MTQAQIARELGIYRTTISRLLKRGREQGILKQKFG-AVVASSDGLL--------EEEQLSAMGQHGALLVEPGDIIGFSWGRAVRSLVENLPQRSQVICVPHVNTLTYGAAARLKAESHLADFPALLDNPLIR-QHFKTISSYWSLDVALVGIGSPAIRDGANWHAFYGSEESDDLNARCSRFYDLVDTNMSEKTLSIEMAKLRQARYSIG-EEKYSGILGALHGRYINCLVTNRET

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.596 to 2gnpA SCOP code=c.124.1.8	TM-score=0.657 to 2gnpA SCOP code=c.124.1.8	TM-score=0.624 to 1uj5A SCOP code=c.124.1.4	TM-score=0.588 to 1i1gA SCOP code=a.4.5.32	TM-score=0.625 to 2nrcB SCOP code=c.124.1.3