Template-based Modeling Results for YIHV_ECOLI

Submitted Primary Sequence

>Length 298
MIRVACVGITVMDRIYYVEGLPTESGKYVARNYTEVGGGPAATAAVAAARLGAQVDFIGRVGDDDTGNSLLAELESWGVNTRYTKRYNQAKSSQSAIMVDTKGERIIINYPSPDLLPDAEWLEEIDFSQWDVVLADVRWHDGAKKAFTLARQAGVMTVLDGDITPQDISELVALSDHAAFSEPGLARLTGVKEMASALKQAQTLTNGHVYVTQGSAGCDWLENGGRQHQPAFKVDVVDTTGAGDVFHGALAVALATSGDLAESVRFASGVAALKCTRPGGRAGIPDCDQTRSFLSLFV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIRVACVGITVMDRIYYVEGLPTESGKYVARNYTEVGGGPAATAAVAAARLGAQVDFIGRVGDDDTGNSLLAELESWGVNTRYTKRYNQAKSSQSAIMVDTKGERIIINYPSPDLLPDAEWLEEIDFSQWDVVLADVRWHDGAKKAFTLARQAGVMTVLDGDITPQDISELVALSDHAAFSEPGLARLTGVKEMASALKQAQTLTNGHVYVTQGSAGCDWLENGGRQHQPAFKVDVVDTTGAGDVFHGALAVALATSGDLAESVRFASGVAALKCTRPGGRAGIPDCDQTRSFLSLFV
CCEEEEECCCEEEEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHCHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCEEEECHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIRVACVGITVMDRIYYVEGLPTESGKYVARNYTEVGGGPAATAAVAAARLGAQVDFIGRVGDDDTGNSLLAELESWGVNTRYTKRYNQAKSSQSAIMVDTKGERIIINYPSPDLLPDAEWLEEIDFSQWDVVLADVRWHDGAKKAFTLARQAGVMTVLDGDITPQDISELVALSDHAAFSEPGLARLTGVKEMASALKQAQTLTNGHVYVTQGSAGCDWLENGGRQHQPAFKVDVVDTTGAGDVFHGALAVALATSGDLAESVRFASGVAALKCTRPGGRAGIPDCDQTRSFLSLFV
4210000010000000103111243120102101100202000000000302020000010021310210021033220303101113313100000001341100000001121202231022220231100002230130022002103412010000010123102100210100000120003002132122003202312211000010320000013212110200402010000000000000000012313022002000000002013310321102032022002122
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIRVACVGITVMDRIYYVEGLPTESGKYVARNYTEVGGGPAATAAVAAARLGAQVDFIGRVGDDDTGNSLLAELESWGVNTRYTKRYNQAKSSQSAIMVDTKGERIIINYPSPDLLPDAEWLEEIDFSQWDVVLADVRWHDGAKKAFTLARQAGVMTVLDGDITPQDISELVALSDHAAFSEPGLARLTGVKEMASALKQAQTLTNGHVYVTQGSAGCDWLENGGRQHQPAFKVDVVDTTGAGDVFHGALAVALATSGDLAESVRFASGVAALKCTRPGGRAGIPDCDQTRSFLSLFV
1	MUSTER	1rk2B	0.276	0.997	3.119	threading_1	AGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERNASALLMQLESLESVMAAAKIAHQNKTIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQ-
2	SPARKS	3go6a	0.280	0.936	3.825	threading_2	APRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPG-PSGTAIIVVDASAENTVLVAPGANAHLTP---VPSAVANCDVLLTQLEIVATALAAARAAQSADAVVMVNASPAGSSLQDLAAIADVVIANEHEANDWPS--------------PPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGRLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRAN-
3	PROSPECT2	3go6A	0.280	0.936	4.541	threading_3	APRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPG-PSGTAIIVVDASAENTVLVAPGANAHLTP---VPSAVANCDVLLTQLEIPATALAAARAAQSADAVVMVNASPAGSSLQDLAAIADVVIANEHEANDWPS--------------PPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGRLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRAN-
4	PPA-I	1rk2B	0.276	0.997	3.789	threading_4	AGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVERERIANASALLMQLESLESVMAAAKIAHQNKTIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQ-
5	HHPRED-l	2rbc_A	0.365	0.966	2.481	threading_5	GKHVLCVGAAVLDTLFRVAD-PKGEGKVLPYEVLQIAEG-ASSAAYAVHR-GGRASLWGAVGDDETGTRILRDLSESGIDTSG-TVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVARALGKPAILDGDVAPVETLELAPAATHIVFSEPAATRLTGLETVKD-LPVLHARYPTFIAVTAGPAGCWWTEADTVHFQTT-QVEAVDTLAAGDIFHGTFALA-AEG-QSRAAVRLSSVAAALKCTVFGGRIGAPTREETEEA-RQW-
6	HHPRED-g	2fv7_A	0.275	0.990	2.183	threading_6	VAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRANVISRAKVMVCQLEITATSLEALTMARRSGVKTLFNPAPAIDLDPQFYTLSDVFCCNESEAEILTGLADAGEAALVLLKRGCQVVIITLGAEGCVVLSQPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLYPNLSLEDMLNRSNFIAAVSVQAAGTQSSYPYKKDLPLTLF---
7	SP3	3go6a	0.283	0.936	3.883	threading_7	APRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPG-PSGTAIIVVDASAENTVLVAPGANAHLTP---VPSAVANCDVLLTQLEIVATALAAARAAQSADAVVMVNASPAGQSLQDLAAIADVVIANEHEANDWPS--------------PPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGRLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRAN-
8	SAM-T99	1rk2B	0.275	0.990	3.889	threading_8	-GSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEARIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPDELLALVDIITPNETEAEKLTGIEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLDR--
9	MUSTER	1vm7A	0.253	0.980	3.015	threading_9	FLVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKCRFVTCIGNDDYSDLLIENYEKLGIT---GYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELIDWNTLSESDILLLQNEIP--FETTLECAKRFNGIVIFDPAPAQGINEEIFQYLDYLTPNEKEIEALSKFLTVEKAAEKFLELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPAREEVEAFLKNL-
10	SPARKS	3b1na	0.197	0.973	3.414	threading_10	--ATLICGSIAYDNIMTFEQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGTLGAVDA-QPYLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGE--AKDIKLAIVGPDGFQGMVQHTEELAQAGVPFIFDPGQGLPLLRRSIELATYIAVNDYEAKLVCDKTGWS---EDEIASRVQALIITRGEHGATIRHRDGTEQIPAVRARVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLASLMGALKIAHQGPQTYAPTRAEIDARFETAF

Predicted Tertiary Structure


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TM-score=0.978 to 1rk2B SCOP code=c.72.1.1	TM-score=0.978 to 1rk2B SCOP code=c.72.1.1	TM-score=0.883 to 1rk2B SCOP code=c.72.1.1	TM-score=0.885 to 1rk2B SCOP code=c.72.1.1	TM-score=0.978 to 1rk2B SCOP code=c.72.1.1