Template-based Modeling Results for YIHO_ECOLI


  Submitted Primary Sequence

>Length 467
MSDHNPLTLKLNLREKIAYGMGDVGSNLMLCIGTLYLLKFYTDELGMPAYYGGIIFLVAKFFTAFTDMLTGFLLDSRKNIGPKGKFRPFILYAAVPAALIATLQFIATTFCLPVKTTIATALFMMFGLSYSLMNCSYGAMIPAITKNPNERAQLAAYRQGGATIGLLICTVAFIPLQSLFSDSTVGYACAALMFSIGGFIFMMLCYRGVKEHYVDTTPTGHKASILKSFCAIFRNPPLLVLCIANLCTLAAFNIKLAIQVYYTQYVLNDINLLSWMGFFSMGCILIGVLLVPLTVKCFGKKQVYLAGMVLWAVGDILNYFWGSNSFTFVMFSCVAFFGTAFVNSLNWALVPDTVDYGEWKTGIRAEGSVYTGYTFFRKISAALAGFLPGIMLTQIGYVPNIAQSDATLQGLRQLIFIWPCALAIIAALTMGFFYTLNEKRFALIIEEINQRKNKEMATEEKTASVTL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSDHNPLTLKLNLREKIAYGMGDVGSNLMLCIGTLYLLKFYTDELGMPAYYGGIIFLVAKFFTAFTDMLTGFLLDSRKNIGPKGKFRPFILYAAVPAALIATLQFIATTFCLPVKTTIATALFMMFGLSYSLMNCSYGAMIPAITKNPNERAQLAAYRQGGATIGLLICTVAFIPLQSLFSDSTVGYACAALMFSIGGFIFMMLCYRGVKEHYVDTTPTGHKASILKSFCAIFRNPPLLVLCIANLCTLAAFNIKLAIQVYYTQYVLNDINLLSWMGFFSMGCILIGVLLVPLTVKCFGKKQVYLAGMVLWAVGDILNYFWGSNSFTFVMFSCVAFFGTAFVNSLNWALVPDTVDYGEWKTGIRAEGSVYTGYTFFRKISAALAGFLPGIMLTQIGYVPNIAQSDATLQGLRQLIFIWPCALAIIAALTMGFFYTLNEKRFALIIEEINQRKNKEMATEEKTASVTL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSDHNPLTLKLNLREKIAYGMGDVGSNLMLCIGTLYLLKFYTDELGMPAYYGGIIFLVAKFFTAFTDMLTGFLLDSRKNIGPKGKFRPFILYAAVPAALIATLQFIATTFCLPVKTTIATALFMMFGLSYSLMNCSYGAMIPAITKNPNERAQLAAYRQGGATIGLLICTVAFIPLQSLFSDSTVGYACAALMFSIGGFIFMMLCYRGVKEHYVDTTPTGHKASILKSFCAIFRNPPLLVLCIANLCTLAAFNIKLAIQVYYTQYVLNDINLLSWMGFFSMGCILIGVLLVPLTVKCFGKKQVYLAGMVLWAVGDILNYFWGSNSFTFVMFSCVAFFGTAFVNSLNWALVPDTVDYGEWKTGIRAEGSVYTGYTFFRKISAALAGFLPGIMLTQIGYVPNIAQSDATLQGLRQLIFIWPCALAIIAALTMGFFYTLNEKRFALIIEEINQRKNKEMATEEKTASVTL
55433322230311110000001000000000000000100011010101000000000100100000000000112322133130200000000000000000000121120010000000000000000000000000001003223111100001200000010000000000011123212110000000000000000000201322223223223312003000100311100000000000000000100000000110022220000000000000000000001003101210000000000000000000100100000000000000000000000000010110021212220200000000001100100000000000100011232222320120021000000000000000000110303331022003202323543222334222234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSDHNPLTLKLNLREKIAYGMGDVGSNLMLCIGTLYLLKFYTDELGMPAYYGGIIFLVAKFFTAFTDMLTGFLLDSRKNIGPKGKFRPFILYAAVPAALIATLQFIATTFCLPVKTTIATALFMMFGLSYSLMNCSYGAMIPAITKNPNERAQLAAYRQGGATIGLLICTVAFIPLQSLFSDSTVGYACAALMFSIGGFIFMMLCYRGVKEHYVDTTPTGHKASILKSFCAIFRNPPLLVLCIANLCTLAAFNIKLAIQVYYTQYVLNDINLLSWMGFFSMGCILIGVLLVPLTVKCFGKKQVYLAGMVLWAVGDILNYFWGSNSFTFVMFSCVAFFGTAFVNSLNWALVPDTVDYGEWKTGIRAEGSVYTGYTFFRKISAALAGFLPGIMLTQIGYVPNIAQSDATLQGLRQLIFIWPCALAIIAALTMGFFYTLNEKRFALIIEEINQRKNKEMATEEKTASVTL
1MUSTER1pv6A0.1360.8651.397threading_1-------MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL------GLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGIYLGFCFNAGAPAVEAFIEKVSRRSN-----FGRARMFGCVGWALGASIVGIMFTIN-----NQFVFWLGSGCALILAVLLFFAKTATVANAVGANHSAFS-LKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFA-TSALEVVILKTLHMFEVPFLLVGCFKYITSQFE-------VRFSATIYLVCFCFKQLAMIFMSVLAGNMYESIG-----------FQGAYLVLGLVALGFTLISVFTL-----SGPGPLSLLRRQVNEVA---------------
2SPARKS1pv6a0.1440.8652.519threading_2-------MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRK--------YLLWIITGMLVMFAPFFIFIFGPLLQLVGSIVGGIYLGFCFN----AGAPAVEAFIEKVSRRSNFGRARMFG-CVGWALGASIVGIMFTI----NNQFVFWLGSGCALILAVLLFFAAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIAPLIINRIGGKNALLLAGTIMSVRIIGSSFA-TSALEVVILKTLHMFEVPFLLVGCFKYITSQFE-------VRFSATIYLVFCFFKQLAMIFMSVLAGNMYESIGF-------QGAY---------LVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA---------------
3PROSPECT21pw4A0.1230.8872.375threading_3FKPAPHKARLPAAEIDPTY--RRLRWQIFLGIFFGYAAYYLVRKQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNP-------RVFLPAGLILAAAVMLFMGFVP--WATSSIAVMFVLLFLCGWFQGMG---WPPCGRTMVHSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYAGNPTVDMICMIVIGFLIYGPVMLIGLHALEL-------APKKAAGTAAGFTGLFGYLGGSVAASAVGYTVDFFGW--------------DGGFMVMIGGSILAVILLIVV--------MIGEKRRHEQLLQELVP----------
4PPA-I1pw4A0.1220.8971.656threading_4PAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNP-------RVFLPAGLILAAAVMLFMGFVP--WATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWGNPTVDMICMIVIGFLIYGPVMLIGLHALELA------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW-------DGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP-------------------------
5HHPRED-l3o7q_A0.1040.8274.960threading_5---------RSYIIPFALLCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMK------KLSYKAG-IITGLFLYALGAALFAEIMN------YTLFLVGLFIIAAGLGCLETAANPFVTVLGP-ESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPLVLSVQTPYMIIVAIVLLVALLILTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG-GHVGL-IALTLCSAFMSIQYPTIFSLGIKNLGQD--------TKYGSSFIV-MTIIGGGIVTPVMGFVSDAGNIPTAE---------------LIPALCFAVIFIFA-RFRSQT------------------------------
6HHPRED-g3o7q_A0.1040.8204.467threading_6------------IIPFALLCSLFFLWAVANNLNDILL-PQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMK------KLSY-KAGIITGLFLYALGAALFAEIMN------YTLFLVGLFIIAAGLGCLETAANPFVTVLG-PESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHVLSVQTPYMIIVAIVLLVALLIMTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGG-HVGL-IALTLCSAFMSIQYPTIFSLGIKNLG-------QD-TKYGSSFI-VMTIIGGGIVTPVMGFVSDAGNIPT---------------AELIPALCFAVIFIFARFRSQT-------------------------------
7SP31pw4a0.1290.8952.473threading_7PAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYFALAMPYLQGFSRGDLGFALSGISIAYGFSKFIMGSVSD------RSN-PRVFLPAGLILAAAVMLFMGFVPWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMVHWW-SQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAAAIVGYTVDFFGWD---------------GGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP-----------------
8SAM-T991pw4A0.1390.8761.066threading_8AAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFA--LAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNP-------RVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWF----GMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFND----WHAALYMPAFCAILVALFAFAMMRDTPGLPPIEEKNDTAKQIFMQYLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVNRGATGVFFMTLVTIATIVYWMNPGNPTVDMICMIVIGFLIYGPVMLIGLHALELAP-------KKAAGTAAGFTGLFGYLGGSVAASIVGYTVDFFGWDGGF---------MVMIGGSILAVILLIVVMIG------EKRRHEQLLQEL-------------------
9MUSTER1pw4A0.1430.8691.381threading_9PHKARLPAAEIDLGIFFGYAAYYLVRK-NFALAMPYLV------QGFSRGDLGFALSGISIAYGFSKFIMGSVSD------RSN--RVFLPAGLILAAAVMLFMGFVPWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMVH---SQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFND--HAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVNRGATGVFFMTLVTIATIVYWMNPGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFG-----------WDGGFMVMIGGSILAVILLIVVMIGE----KRRHEQLLQELVP-----------------
10SPARKS1pw4a0.1340.8952.481threading_10PAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLFALAMPYLGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNP-------RVFLPAGLILAAAVMLFMGFVPWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAAAIVGYTVDFFGWD-----------GGFMVMIGGSILAVILLIVVMIGE----KRRHEQLLQELVP-----------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.913 to 1pv6A
SCOP code=f.38.1.2
TM-score=0.885 to 1pw4A
SCOP code=f.38.1.1
TM-score=0.902 to 1pv6A
SCOP code=f.38.1.2
TM-score=0.878 to 1pw4A
SCOP code=f.38.1.1
TM-score=0.893 to 1pw4A
SCOP code=f.38.1.1