Template-based Modeling Results for YIHG_ECOLI

Submitted Primary Sequence

>Length 310
MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVKLLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICNHRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWSLDMPFMKRYSRAYLLRHPERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIAMALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYINDKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQNK
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVKLLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICNHRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWSLDMPFMKRYSRAYLLRHPERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIAMALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYINDKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQNK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCHHHHHHHCCCEEEECCCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHCCCCCEEEEEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVKLLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICNHRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWSLDMPFMKRYSRAYLLRHPERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIAMALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYINDKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQNK
5412101110010000000000000000000000000000000100000110121001000000000000000001010201010212321244310000000101000000000033211201000121012011000001002000021213210231132113103202300230332110000002112123332332212232002131200000020114301100000000233342201100113112000001101013212232232320132012002201221130022113233444
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVKLLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICNHRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWSLDMPFMKRYSRAYLLRHPERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIAMALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYINDKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQNK
1	MUSTER	1k30A	0.095	0.987	0.860	threading_1	LDVRSEEELLSCIKKETEAKLPPNVAAGMEELYQNYRNAVIESGNPKADEIVLSNMTVALDRILLDVEDYYIFGQNYIRPLNSFVGNLSLFKQGHNVVLISNHQTEADPAIISLLLEKTNPYTIFVAGDRVLADPLCKPFSIGRNLICVSKKHMFDIPELTETKRKANTRSLKEMALLLRGSQLIWIAPSGGRDRPDPSTGEWYPAP--FDASSVDNMRRLIQHSDVPGHLFPLALLHDIMPPPSQVEIEIRVIA-AGLSVPEISFEEI-AATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLG
2	SPARKS	1k30a	0.134	0.987	0.738	threading_2	EAGKLPPNVAAGMEELYQNYRNAVIESADEIVLSNMTVALDRILLDVEDPFVFSSHHKAIREPFDYYIFGQNYIRPLIDFGNSFVGNLSLFQQGHNVVLISNHQTEADPAIISLLLEKTNPNTIFVAGDRVLADPL--CKPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLSQLIWIAPSGGRDRPDPSTGEWYPAP--FDASSDNMRRLIQHSDVPGHLFPLALLCHDIMPPPSQVEIEIRVIAFNGAGLSVAPISEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLG
3	PROSPECT2	1k30a	0.113	0.997	1.813	threading_3	SRKFLDVRSEEELLSCIKKETPNVAAGMEELYQNYRNAVIVLSNMTVALDRILLDVEDYYIFGQNYIRPLIDFGNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYTIFVAGDRVLADPLCKPFSIGRNLICVKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDAS-SVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPSQVEIEIRVIAFNGAGLSVAPSFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQQPW
4	PPA-I	1k30A	0.114	0.994	0.972	threading_4	LPPNVAAGMEELYQNYRNAVIESGNPKADEIVLSNMTVALDRILLDVEDPFVFSSHHKAIREPFDYYIFGQNYIRPLIDFGNSFVGNLSLFKDGHNVVLISNHQTEADPAIISLLLEKTNPYTIFVAGDRVLADPLCKPFSIGRNLICVKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAP--FDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPEIEIRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLG
5	HHPRED-l	1iuq_A	0.110	0.906	5.844	threading_5	DVRSEEELLSELYQNYRNAVIES-GNPADEIVLSN-TVALDRLDVEDVFSSHHKAIRE--PFDYYIFGQ---NYIRPLDFGNSFVGNLSKLQQGHNVVLISNHQTEADPAIISLLLEKTNPNTIFVAGDRVLADPLCKPFSIGRNLICVYSKKH-FDIPTETKRKANTRSLKE-ALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDN-RRLIQHSDVPLFPLAL---LCHDI-PP---------RFNGAG--LSVAP--EISFEEHKNPEEVREAYSKALFDSVA-QYNVLKTAISGKQGL-
6	HHPRED-g	1iuq_A	0.117	0.913	3.602	threading_6	FLDVRSEE---ELLSCIKKETEANVAAG-E--ELYQNYRNAVIESGNPKA-DEIVLSN-LDRILLYYIFGQNYIRPLIDFGNSFVGNLSLFQQGHNVVLISNHQTEADPAIISLLLEKTNPYIIFVAGDRVLADPLCKPFSIGRNLICVYSKK-FDIPELTETKRKANTRSLKE-ALLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPF--DASSVDN-RRLIQHSDVPGHLFPLALLHDI-PP---------RVIANGAGLSVAEISFEIAAT---HKNPEEVREAYSKALFDSVA-QYNVLKTAISGKQ
7	SP3	1k30a	0.141	0.987	1.165	threading_7	EAGKLPPNVAAGMEELYQNYRNAVIESADEIVLSNMTVALDRILLDVSHHKAIREPFDYYIFGQNYIRPLIDFGNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPNTIFVAGDRVLADPLC--KPFSIGRNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLSQLIWIAPSGGRDRPDPS--TGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLHDIMPPPSQVEIEIRVIAFNGAGLSVAPISEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLG
8	SAM-T99	1k30A2	0.170	0.513	0.845	threading_8	-------------------------------------------------PFDYYIFGQNYIRPLIDFGNSFVGNLSLFKDIE------EKLQQGHNVVLISNHQTEADPAIISLLLEKIAENTIFVAGD------------HMFDIPELTETKRK----------ANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDP----------------------------------STGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLC----------------------------------------
9	MUSTER	1k30A2	0.112	0.835	0.843	threading_9	----------------------------------------------SSHHKAIREPFDYYIFGQNYIRPLIDFGNSFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYTIFVAGDRVLADPLCKPFSIGRNLICVKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAP--FDASSVDNMRRLIQHSDVPGHLFPLALLHD-PPPSQVEIEIAFNGAGLSVA-PEISFEEI-AATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLG
10	SPARKS	3ap1a	0.063	0.865	0.572	threading_10	YGKAMPLIFVGGVTTLMRAMLDAHPEVRCGEETRIIPRVLAMRQAWSKSGREKLRLDEAGVTDEVLDAAMQAFILEVI---------AKHGEPARVLCNKDPF-----TLKSSVYLSRLFPNSKFLL---MVRDGRASVHSMITRKVTIAGFDLSSYRDCLTKWNKAIEVMYAQCMEVGKEKCLPVYYPRGIAWSDAVLHHEDLIGKPGGVSLSKIERSTDQVIKPVNLEALS---KWTGHIPGDVVRDMAQIAP----MLAQLDPYANPPNYGNPDPFVINNTQRVLKGDY------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.860 to 1k30A SCOP code=c.112.1.1	TM-score=0.871 to 1k30A SCOP code=c.112.1.1	TM-score=0.894 to 1k30A SCOP code=c.112.1.1	TM-score=0.882 to 1k30A SCOP code=c.112.1.1	TM-score=0.903 to 1k30A SCOP code=c.112.1.1