Template-based Modeling Results for YIGL_ECOLI

Submitted Primary Sequence

>Length 266
MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFQYALYEPGLLEPEGVSKVFFTCDSHEQLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVPHYLRKLYLS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFQYALYEPGLLEPEGVSKVFFTCDSHEQLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVPHYLRKLYLS
CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCHHHHHHHHHCCCCCEEECHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHHHCCEEEECCCCCHHHHHHCCCCEECCCCCCHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFQYALYEPGLLEPEGVSKVFFTCDSHEQLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVPHYLRKLYLS
20100000021000223320032023002101432010000012112200300230403100000100100113111001230233001100100232220000001121000233222112103312231111221113332101000002233102300310133124202000002100100122011020020003302021200000010100020010000000110013201310321200111112000200220115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFQYALYEPGLLEPEGVSKVFFTCDSHEQLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVPHYLRKLYLS
1	MUSTER	1nf2A	0.252	0.985	3.128	threading_1	MYRVFVFDLDGTLLNDNLEISEKDRRNIEKLSR-KCYVVFASGRMLVSTLNVEKKYKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPL-NVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASD--IVTLTNNDSGVSYVLERISTD
2	SPARKS	3r4ca	0.230	0.962	4.195	threading_2	MIKVLLLDVDGTLLSFEHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEI-DAVPYD-GVIALNGAECVLRDGSVIRKVAIPAQDFRKSMELAREF-DFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPVVDIEEMFERKECCQLCFYFDEEAEQKVMPLLS-----GLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVAD--FVTDTVDNSGLYKALKHFGVI
3	PROSPECT2	1rlmA	0.205	0.989	3.928	threading_3	AVKVIVTDMDGTFLNDAKTYNPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYE-HGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIAR--YATDDNNHEGALNVIQAVLFN
4	PPA-I	1nf2A	0.252	0.985	4.324	threading_4	MYRVFVFDLDGTLLNDNLEISEKDRRNIEKLSR-KCYVVFASGRMLVSTLNVEKKYFKTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPL-NVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASD--IVTLTNNDSGVSYVLERISTD
5	HHPRED-l	3pgv_A	0.863	0.932	2.749	threading_5	-YQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSY-ITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRNDPKIVTNVYREDEWY-NRHR-----FFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQA-NARWGDRVNVSFSTLTCLEV-AGGVSKGHALEAVAK-LGYTLSDCIAFGDG-NDAE----AGKGCI-ANAHQRLKDLHPELEVIGSNADDAVPRYLRKLYL-
6	HHPRED-g	3pgv_A	0.863	0.932	2.478	threading_6	-YQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSY-ITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRNDPKIVTNVYREDEWY-NRHR-----FFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQA-NARWGDRVNVSFSTLTCLEV-AGGVSKGHALEAVAK-LGYTLSDCIAFGDG-NDAE----AGKGCI-ANAHQRLKDLHPELEVIGSNADDAVPRYLRKLYL-
7	SP3	3pgva	0.744	0.940	4.337	threading_7	-YQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIR-SYITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRNDPKIVTNVYREDEWYNRHRF------FKEAVFNYKLYEPGELDPQGIS-KVFFTCEDHEHLLPLEQANARWGDRVNVSFSTLTCLEVAG-GVSKGHALEAVAK-LGYTLSDCIAFGDG-NDAELSAG---KGCIANAHQRLKDLHPELEVIGSNADDAVPRYLRKLYL-
8	SAM-T99	1rkqA	0.264	0.981	3.617	threading_8	-IKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMGDYCITYNGALVQKAAGSTVAQTALSYDDYRFLEKLSREVG-SHFHALDRTTLYTNRDISYYTVHESFVATIPLVFCEAEKMDPNFLKVMMI-DEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANF--VTKSNLEDGVAFAIEKYVLN
9	MUSTER	1rkqA	0.262	0.989	3.124	threading_9	AIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEDYCITYNGALVQKADGSTVAQTALSYDDYRFLEKLSREV-GSHFHALDRTTLYTANISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVAN--FVTKSNLEDGVAFAIEKYVLN
10	SPARKS	3niwa	0.211	0.962	4.171	threading_10	KYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRNEGFILSYNGGEIINWESKE-YENVLPNEVVPVLYECARTN-HLSILTYDGAEIVTENSLDPYVQKEAFLNKAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGTR-EEVIAIGDGYNDLSIKFAGG---VAGNAQEPVKKAAD--YITLTNDEDGVAEAIERIF--

Predicted Tertiary Structure


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TM-score=0.980 to 1nf2A SCOP code=c.108.1.10	TM-score=0.979 to 1nf2A SCOP code=c.108.1.10	TM-score=0.846 to 1rkqA SCOP code=c.108.1.10	TM-score=0.881 to 1rkqA SCOP code=c.108.1.10	TM-score=0.979 to 1nf2A SCOP code=c.108.1.10