Template-based Modeling Results for YIGI_ECOLI

Submitted Primary Sequence

>Length 155
MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAFKNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTIDLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIASATATYMVG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAFKNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTIDLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIASATATYMVG
CCCCCCHHHHHHHHHHHHHHCCCHHHHCCCEEEEEECCEEEEEEECCHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCEEEEEEEEEEECCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAFKNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTIDLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIASATATYMVG
55322223200210020012201002102010120233101010202320011221000000000000100000000011123232222331234222000010200001114222000100002213200002010113341100101000113
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAFKNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTIDLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIASATATYMVG
1	MUSTER	3e8pA	0.436	0.961	3.170	threading_1	-SNPI-QAEVLKRVAEVFDQHVPFHNLLGLDIKRYDIDGVEVAIN-KPELIGNIHQQILHGGVTATVLDVVGGLTAFAGLVASRDDWTIEELQQRLQTLGTI-DRVDYLRPGRGQIFTGTGSVIRAGNRVSVCRELHN-EQGTHIAFGTGTYVG-
2	SPARKS	3e8pa	0.436	0.961	3.118	threading_2	--SNPIQAEVLKRVAEVFDQHVPFHNLLGLDIKRYDIDGVEVAIN-KPELIGNIHQQILHGGVTATVLDVVGGLTAFAGLVASRDDWTIEELQQRLQTLGTI-DRVDYLRPGRGQIFTGTGSVIRAGNRVSVCRELHN-EQGTHIAFGTGTYV-G
3	PROSPECT2	3f5oA	0.244	0.871	2.483	threading_3	----TSMTQSLREVIKAMTKARNFERVLGITLVSAAPGKVICEMKVEEEHTN--AIGTLHGGLTATLVDNISTMALLC--------------TERGAPGVSVDMNITYMSPALGEDIVITAHVLKQGKTLAFTSVDLTNATGKLIAQGRHTKHLG
4	PPA-I	3e8pA	0.430	0.961	3.133	threading_4	--SNPIQAEVLKRVAEVFDQHVPFHNLLGLDIKRYDIDGVEVAIN-KPELIGNIHQQILHGGVTATVLDVVGGLTAFAGLVASRDDWTIEELQQRLQTLGTI-DRVDYLRPGRGQIFTGTGSVIRAGNRVSVCRELHN-EQGTHIAFGTGTYVG-
5	HHPRED-l	1vh5_A	0.140	0.877	2.637	threading_5	-SLIWKRKITLEALNA-M-GEGNMVGFLDIRFEHIGDDTLEATMPVDSRTKQ--PFGLLHGGASVVLAESIGSVAGYLCTEGE-------------QKVVGLEINANHVRSAREGRVRGVCKPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAI-
6	HHPRED-g	3f1t_A	0.209	0.832	2.371	threading_6	---NPL----LER-ARRFLSALRHCQVLGLTVEAADEKGLTLRLPYSQAIIGNPESGVVHGGAITTL-DTTCGISTVCV-------------LPDFEICPTLDLRIDY-HPAEHKDVYGFAECYRVTPNVIFTRGFAYQDPGQPIAHVVGAF---
7	SP3	3e8pa	0.443	0.961	3.045	threading_7	-SNPI-QAEVLKRVAEVFDQHVPFHNLLGLDIKRYDIDGVEVAIN-KPELIGNIHQQILHGGVTATVLDVVGGLTAFAGLVASRDDWTIEELQQRLQTLGTI-DRVDYLRPGRGQIFTGTGSVIRAGNRVSVCRELHN-EQGTHIAFGTGTYV-G
8	SAM-T99	3e1eC	0.216	0.865	3.281	threading_8	----EPRFAGYAQKVRDSFARQPVMATLGARIDTLLPGRVELCMPYDRALTQQ--HGFLHAGIVSTVLDSACGYAAFSLM-------------EEEAAVLTVEFKVNFLNPAEGERFAFRAEVVKPGRTLTVATATAYDGEERAIATMTATLM--
9	MUSTER	3hduA	0.308	0.923	3.012	threading_9	---SKNEEVLFSAVNEIFEEKIPFNKIIGLKVRFISPEQVKLSFERDELIGN--AIRRLYGGVISSAIDTAGLAAFGFQEKSGKPEEKL------AIGRLSTSLHVEYLRPGLGREFVCTGYNVRTGNKVAVIRTELND-QDELIAVGSVSYILV
10	SPARKS	3e1ea	0.244	0.845	2.856	threading_10	--------GYAQKVRDSFA-RQPVMATLGARIDTLLPGRVELCMPYDRALTQ--QHGFLHAGIVSTVLDSACGYAAFS-------------LMEEEAAVLTVEFKVNFLNPAEGERFAFRAEVVKPGRTLTVATATAYAGEERAIATMTATLMAL

Predicted Tertiary Structure


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TM-score=0.775 to 1vh9A SCOP code=d.38.1.5	TM-score=0.787 to 1vh9A SCOP code=d.38.1.5	TM-score=0.777 to 1vh9A SCOP code=d.38.1.5	TM-score=0.776 to 1zkiA SCOP code=d.38.1.5	TM-score=0.780 to 1vh9A SCOP code=d.38.1.5