Template-based Modeling Results for YIDZ_ECOLI

Submitted Primary Sequence

>Length 319
MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA
CCCCHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCEEEECCCCCCCCHHHHCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA
5432132001000100100032210120144031110000300120031131200000131121021011003201300310130023332323320101000010011000010031013311401010111223112102313000000023222323311221222021110022200000133111133201011003130000013323221011003312232200000010200010014121000000010021013123120010202133243322200000000521221210200030022002325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA
1	MUSTER	2esnC	0.275	0.925	3.161	threading_1	-HPLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLEEPFVPGQSQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNARKLSVEALASGRIDFALGY-----------DRLPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTD--FLLTAPRHAARALA-EAAGLALYPAPFDIP-----PYVLRLYSHV--QHRDAHAWMIGQLKGLD--IS
2	SPARKS	2esna	0.280	0.928	5.767	threading_2	--PLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLEEPFVPGQSQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAEKLSVEALASGRIDFALGYDEEHER-------LPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTDF--LLTAPRHAARAL-AEAAGLALYPAPFDIP-----PYVLRLYSHV--QGRDAHAWMIGQLKGLD----
3	PROSPECT2	2esnA	0.257	0.928	4.535	threading_3	--PLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLERPFVPGQSQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAERKLVEALASGRIDFALGYDEEHE-------RLPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTDF-LLTAPRHAARALAEAAG--LALYPAPFDIP-----PYVLRLYSHV--QGRDAHAWMIGQL----KGLD
4	PPA-I	2esnC	0.278	0.925	6.015	threading_4	-HPLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLERPFVPGQSQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAERLSVEALASGRIDFALGY-----------DRLPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTDFLLTA--PRHAARALA-EAAGLALYPAPFDIP-----PYVLRLYSHVQ--HRDAHAWMIGQLKGLDIS--
5	HHPRED-l	1uth_A	0.197	0.668	3.587	threading_5	---------------------------------------------------------------------------------------TRNSFDPSTRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQISTLRPAGNLKEDMESGAVDLALGLLPELQ----------TGFFQRRLFRHRYVCMFRKDHPSAKSPMSLKQFSELEHVGVVALNTGHGEVDGLLERAGIKRRMRLVVPHFIAIGPILHSTDLIAT--VPQRFAV-RCEVPFGLTTSPHPAK-----LPDIAINLFWHAKYNRDPGNMWLRQLFVELFSEA-
6	HHPRED-g	1uth_A	0.210	0.671	3.550	threading_6	---------------------------------------------------------------------------------------TRFDPFASTRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQISTLRPNAGNKEDMESGAVDLALGLLP----------ELQTGFFQRRLFRHRYVCMFRKDHPSAKSPMSLKQFSELEHVGVVALNTGHGEVDGLLERAGIKRRMRLVVPHFIAIGPILHSTD--LIATVPQRFAVRC-EVPFGLTTSPHPAKLP-----DIAINLFWHAKYNRDPGNMWLRQLFVELFSEAH
7	SP3	2esna	0.281	0.925	5.927	threading_7	L---LRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLERPFVPGQSQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAEKLSVEALASGRIDFALGYDEEHER-------LPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTD--FLLTAPRHAARAL-AEAAGLALYPAPFDIP-----PYVLRLYSHV--QGRDAHAWMIGQLKGLD----
8	SAM-T99	2esnC	0.274	0.903	6.155	threading_8	----LRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLEEWRPFVPGQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAERKLSEALASGRIDFALGYD-----------RLPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTD--FLLTAPRHAARAL---AAGLALYPAPFDIPP-----YVLRLYSHVQHRD--AHAWMIGQLKGLD----
9	MUSTER	1utbB	0.210	0.702	2.130	threading_9	----------------------------------------------------------------------------YALNTLQTALTDSFDPFASTRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQISTLRPNANLSEDMESGAVDLALGLL----------PELQTGFFQRRLFRHRYVCMFRKDHPSAKSPMSLKQFSELEHVGVVALNTGHGEVDGLLERAGIKRRMRLVVPHFIAIGPILHSTD--LIATVPERFAVRC-EVPFGLTTSPHPAKLP-----DIAINLFWHAKYNRDPGNMWLRQLFVELFSE-A
10	SPARKS	3fxra	0.164	0.918	3.707	threading_10	------MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMPAVSPQLRDGTLDFALTAAHK--------HDIDTDLEAQPLYVSDVVIVGQRQHPMANAT-RLAELQECRWAFSSAPRGPGAIIRNAFARYGLPEKLGLVCESFLALPGVVAHSDL--LTTMPRTLYERNAFKD-QLCSIPLQDALPNP-----TIYVLRRHDLPVTPAAAGLIRWIQHHAL---

Predicted Tertiary Structure


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TM-score=0.932 to 2esnC SCOP code=a.4.5.37	TM-score=0.934 to 2esnC SCOP code=a.4.5.37	TM-score=0.805 to 2esnC SCOP code=a.4.5.37	TM-score=0.803 to 2esnC SCOP code=a.4.5.37	TM-score=0.936 to 2esnC SCOP code=a.4.5.37