Template-based Modeling Results for YIDR_ECOLI

Submitted Primary Sequence

>Length 415
MAGPVLYQDRAMKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQGAHVGVVTVHPKSEKYVFIHGPENPDETWHYDFHHRRGVIVEGGKMSNLDAMDITAPYTPGVLRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTEHHANSPSADAVVFSPDGQWLAWMEGGQLWITETDR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAGPVLYQDRAMKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQGAHVGVVTVHPKSEKYVFIHGPENPDETWHYDFHHRRGVIVEGGKMSNLDAMDITAPYTPGVLRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTEHHANSPSADAVVFSPDGQWLAWMEGGQLWITETDR
CCCCEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCEEEECCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEECCCCCCCCCCCEECCCCCEEEEEECCCEEEEECCCCCEEEECCCCCCCCCCCCCEECCCCCEEEEEECCCEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAGPVLYQDRAMKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQGAHVGVVTVHPKSEKYVFIHGPENPDETWHYDFHHRRGVIVEGGKMSNLDAMDITAPYTPGVLRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTEHHANSPSADAVVFSPDGQWLAWMEGGQLWITETDR
5512101233223202112221101101000110100000011221212011011020321211000102210000000001423200001034123411001021210000222302112112001111211131021010001302100001112101222121201100000112213133312232201000000122132233113100112321211100000002111241220010000101323221322232212113121212241121110012332212111211311010123111000001244220100000042221110132323131210102202100000212000010321311101323212211300100120110000111211223344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAGPVLYQDRAMKQITFAPRNHLLTNTNTWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRASQGAHVGVVTVHPKSEKYVFIHGPENPDETWHYDFHHRRGVIVEGGKMSNLDAMDITAPYTPGVLRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQKQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDNRIACAHAQSGEVEYLTEHHANSPSADAVVFSPDGQWLAWMEGGQLWITETDR
1	MUSTER	3pe7A	0.129	0.819	1.464	threading_1	MAKGKQIPGAQVTRLTPPDVTRNYFYQKCFTRDGSKLLFGGAFDGP----WNYYLLDLNTQVATQLT-EGRGDNTFGGFLSPDDDALFYVKDGR-------------NLMRVDLATLEENVVYQVPAEWV------GYGTWVANSDCTKLVGIEIRR--EDWVP---------------LTDWKKFHEFYFTKPCCRLMRVDLKT---GESTVILQENQW--------LGHPIYRPDDSTVAFCHE----GPHDLVDAR----------MWLINEDGTNMRKVKTHAE-------GESCTHEFWVPDGSALVYVSYLKSPDRFIYSADPETLENRQLTSMPA--CSHLMSNYDGSLMVGDGDPFLYVFNMKNGTQHRVARHDTSWKVFEHPSFTPDDKQILFTSDVHLYLATLPE
2	SPARKS	3ow8a	0.091	0.687	3.092	threading_2	-YGILFK--------QEQAHDDAI-WSVAW---GETVVTGS-------LDDLVKVWKWRDERLDLQWSEGHQLGVVSVDISHTLPIAASSS-LDAH--IRLWDLENGKQIKSID------------------AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE-------------------------SGKKEYSLDTRGKF------------------------ILSIAYSPDGKYLASGGIINIFDIATGKLLHTLEG-------------------------------HAMPIRSLTFSPDSQLLVTASDDGY----IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSDKSVKVWDVGTRTCVHT--FFDHQDQVWGVKYNGNGSKIVSVGDDQIYDCP---
3	PROSPECT2	3pe7A	0.108	0.805	2.116	threading_3	MAKGKQIPGAQVTRLTPPDVTRNYFYQKCFTRDGSKLLFGGAFDGPW----NYYLLDLNTQVATQL-TEGRGDNTFGGFLSPDDDALFYVK---DGRNLMRVDLATLEENVVYQVPAE----------------WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCVDLKTGESTQENQWLGHPIYRPYD--------------------DSTVAFCHE--GPHDLVDARMWLINE--------------------------DGTNMRKVKTHAE-------GESCTHEFWVPDGSALVYVSLKGSPDRFIYSADPETLENRQLTSMPA--CSHLMSNYDGSLMVGDGSDALYVFNMKNGTQHRVARHDTSWKVFEGPSFTPDDKQILFTSDVHGYLATLPK
4	PPA-I	2ce8A	0.119	0.771	1.645	threading_4	-------------DYFQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPG--------IPRHARQINTLNHGEVVCAVTISNPTRHVYTGGK---------------GCVKVWDISHPGN--KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPA-----------------------------------------------CYALAISPDSKVCFSCCNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTNTVRSWDLREGRQLQQFTSQIFSLGYCPTGEWLAVGMESSN----VEVLHVNKPDKYQL-HLHESCVLSLKFAYCGKWFVSTGDNLLNAWRTPYGASIFQS---KESSSVLSCDISVDDKYIVTGSGDKVYEVIY--
5	HHPRED-l	1k32_A	0.095	0.961	2.291	threading_5	CCDD-LWKSGSTRKIVSNL---GVINNARFFPDGRKIAIRVMRGSSL-NTADLYFYNGENGEIKRITYFSRRMFTDVAGFDPDGNLIISTDAMQPMTCLYRVENDGINFVPLNADGRRRGKIWEVNSGAKIVDMSTHVSSPVIVGHR--IYFITIDGFGQIYSTDLDGKDLRKHTSFTDPHLNTDRRILFSKGGSIYIFNPDTEKIEKIEESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLRIRYVRRGGDTKVAF-IHGTREGDFLGIYDYRTGKAEKFNLGNVFAMGVDRNGKFAVVANDR----FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFMQAIHVYDMEGRKIFAATTE---NSHDYAPAFDADSKNLYYLSYRSLPDREVV-
6	HHPRED-g	1k32_A	0.096	0.954	1.651	threading_6	DLWEHDLKSGSTRKIV---SNLGVINNARFFPDGRKIAIRVMRGSS-LNTADLYFYNGENGEIKRITYFGRRMFTDVAGFDPDGNLIISTDAMQSMTCLYRVENDGINFVPLNLGPELKIWIENSGAFKKIVDMSTHVSSPVIVGHR--IYFITDDGFGQIYSTDLDGKD--LRKHTSFTDY-YPRHLNTDGRRILFSKGPDTEKIEKIEIG-DLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQIQDVSGTYV--LKVPEPLRIRYVRRGGDTKVFLGIYDYRTGKAEKFNLGNVFAMGVDRNGKFAVVANDRFE----IMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFMQAIHVYDMEGRKIFAATT---ENSHDYAPAFDADSKNLYYLSYRSSPDRVVLN
7	SP3	3ow8a	0.099	0.684	3.162	threading_7	-YGILFKQ------EQ----AHDDAWSVAW---GETVVTGS-------LDDLVKVWKWRDERLDLQWSEGHQLGVVSVDISHTLPIAASSSL-DAHIRLWD--LENGKQIKSID------------------AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVES-------------------------GKKEYSLD------------------------TRGKFILSIAYSPDGKYLASGGIINIFDIAT----------------------GKLLHTLEG---------HAMPIRSLTFSPDSQLLVTASDD--GYIKIYD--VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSDKSVKVWDVGTRTCVHT--FFDHQDQVWGVKYNGNGSKIVSVGDIHIYDCP---
8	SAM-T99	2ivzD2	0.139	0.557	2.763	threading_8	T------------------------------------------------------------------------------------RIAYVVQTFP--------------------YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR-----------------------------------------------HNGAPAFSPDGSKLAFAL-----------------SKTGSLNLYVMDLASGQIRQVTDGRSNN---------TEPTWFPDSQNLAFTS-DQAGRPQVYKVNINGGAPQRITWEGSQN-QDADVSSDGKFMVMVSSQHIAKQDLATGGVQVLSSTF----LDETPSLAPNGTMVIYSSSQ-GMGSVLNL
9	MUSTER	2ce8A	0.141	0.769	1.463	threading_9	-------------DYFQGAMGSKPAYSFHVTADGQMQPV------PFPPDALIGPGIPRH--ARQINTLNHGEVVCAVTISNPTRHVYTGG--KGCVKVWDIS---------HPGNKSPVSQLDCLNR------DNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP-----------------------TPRIKAELTS------------------------SAPACYALAISPDSKVCFSCCNIAVWQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMES--SNVEVLHV--NKPD-KYQLHLHESCVLSLKFAYCGKWFVSTGDNLLNAWRTPYGASIFQS---KESSSVLSCDISVDDKYIVTGSGDKVYEVIY--
10	SPARKS	4a11b	0.116	0.831	2.818	threading_10	------------------------MLSARQTGLEDPLRL-------RRAESTRRVLGLELNKDRDV-ERIHGGGINTLDIEPEGRYMLSGG-SDGVIVLYDLENSS-------RQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPDTGMFTSSSFDKTLKVWDTNTLQDVFNFEETVYSHHMSPVSTKHC------LVAVGTRGPKVQLCD-LKSGSCSHILQGHRQEILAVSWSPRYDYILATARVKLWDVRRASGCLITLDQHNGKK---------------SQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR----MRLWNSSNGENTLVNYGKVCNNSKTVSCGCSSEFVFVPGSTIAVYTVYSGEQITM--LKGHYKTVDCCVFQSNFQELYSGSRDCAWVPSL--

Predicted Tertiary Structure


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TM-score=0.664 to 1vyhT SCOP code=b.69.4.1	TM-score=0.684 to 1pevA SCOP code=b.69.4.1	TM-score=0.748 to 1vyhT SCOP code=b.69.4.1	TM-score=0.642 to 1vyhT SCOP code=b.69.4.1	TM-score=0.840 to 2ce8A SCOP code=b.69.4.1