Template-based Modeling Results for YIDL_ECOLI

Submitted Primary Sequence

>Length 297
MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN
CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEEECCEEEEECCCEEEEECCCCCEEEEECCCCEEEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN
544322222142212230100122310111011011121112311211222133312102000000002010201022112010321000001122101010232101000000102002201223312122031012102200200211221122001000020012000101232333233310220010013104330101100310300211012000321320022001001021011114432220020022031210110020014213101210142244322322345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHPTDASPHN
1	MUSTER	3gbgA	0.151	0.848	2.270	threading_1	---------------------------KKSFQTNV---------YRSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCVSYEINSSSIILLKKNSIQRFSLTDENINVSVITISDSFIRSLKILGNKDLLLWNCEHNDIAVLSEVVNGFREIYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--------
2	SPARKS	3gbga	0.134	0.852	3.200	threading_2	----------------------KKSFQTNVYRM-------------SKFDTYIFNNLYINDYKMFWIDSGIAKLIDNCLVSYEINSSSIILLKKNSIQRFSLTDENINVSVITISDSFIRSLYILGNKDLLLWNCEHNDIAVLSEVVNGFREINSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--------
3	PROSPECT2	3gbgA	0.164	0.842	3.781	threading_3	KSFQTNVYRMSKFDTYIFNNLY------------------------------------INDYKMFWIDSGIAKLIDKNLVSYEINSSSIILLKKNSIQRFSLSDENINVSVITISDSFIRSLKSYILGNKDCEHNDIAVLSEVVNGFREINYSDEFLKVFFS--GFFSKVEKKYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELES-RGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--------
4	PPA-I	3gbgA	0.146	0.852	2.965	threading_4	-----------------------------------KKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCVSYEINSSSIILLKKNSIQRFSLTDENINVSVITISDSFIRSLILGNKDLLLWNCEHNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--------
5	HHPRED-l	3gbg_A	0.154	0.832	4.085	threading_5	----------------KKSFQTNVYR------------MS-------KFDTYIFNNLYINDYKMFWIDSGIAK-LIDKNVSYEINSSSIILLKKNSIQRFSLSDENINVSVITISDSFIRSLKSYILDLLNCEHNDIAVLSEVVNGFREI-NYSDE----FLKVFFSGFFSKVEKKIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELE-SRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--------
6	HHPRED-g	3gbg_A	0.153	0.838	3.730	threading_6	-----------------------KKSFQTNVYRMS------------KFDTYIFNNLYINDYKMFWIDSGIAK-LIDKNVSYEINSSSIILLKKNSIQRFSLLDENINVSVITISDSFIRSLKSY-NKDLLNCHNDIAVLSEVVNGFREIN-YSDEFLKVFFSGFFSKVEKKYNS-IFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELE-SRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--------
7	SP3	3gbga	0.158	0.852	3.109	threading_7	----------------KKSFQTNVYRMSKFDTYI-------------------FNNLYINDYKMFWIDSGIAKLIDKNCVSYEINSSSIILLKKNSIQRFSLTSLSINVSVITISDSFIRSLYILGNKDLLLWNCEHNDIAVLSEVVNGREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGV--------
8	SAM-T99	3oioA	0.275	0.367	3.089	threading_8	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NAGSQPKLTEAV-SLEANIEEPLSTDDIAYYVGVSRRQLERLFKQYLGTVPSKYYLELRLNRARQLLQQTSKSIVQIGLACGFSSGPHFSSTYRNHFNITPREERAQRAQ---------
9	MUSTER	2k9sA	0.217	0.357	1.285	threading_9	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADSFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE----------
10	SPARKS	2k9sa	0.217	0.357	2.145	threading_10	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDNRVREACQYISDHLADNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCE----------

Predicted Tertiary Structure


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TM-score=0.476 to 1xjaC SCOP code=b.82.4.1	TM-score=0.472 to 1xjaC SCOP code=b.82.4.1	TM-score=0.474 to 1xjaC SCOP code=b.82.4.1	TM-score=0.473 to 1d5yA SCOP code=a.4.1.8	TM-score=0.475 to 1xjaC SCOP code=b.82.4.1