Template-based Modeling Results for YIDK_ECOLI

Submitted Primary Sequence

>Length 571
MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEVTSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHGAAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQLTTVHAEKLNSIGGPTDPLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTLVNNVLPVPMVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAPQGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGFIKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPAVTFTPDGKDSL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEVTSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHGAAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQLTTVHAEKLNSIGGPTDPLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTLVNNVLPVPMVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAPQGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGFIKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPAVTFTPDGKDSL
CCHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEVTSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHGAAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQLTTVHAEKLNSIGGPTDPLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTLVNNVLPVPMVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAPQGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGFIKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPAVTFTPDGKDSL
4311000000000000000000102233222231000012203000000000000000110000001003100000010000000000000000110142110000100121123112000000000000000000000000000100010010011121010100000000000000001001000001000000100000000010011113111110021012122331211101112010000000000000011001200021001032222012000000001000000000000000100331231211001001200010000000000000000001000100000000000330033313232111001100000000000000001211310010011000000000000000000022011100100000000000001000302020000000000000000000000224222222331220203113202100000000000000000301011231000000000000000000110233333201012314439
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEVTSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHGAAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQLTTVHAEKLNSIGGPTDPLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTLVNNVLPVPMVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAPQGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGFIKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPAVTFTPDGKDSL
1	MUSTER	3dh4A	0.281	0.855	3.143	threading_1	-----------------GGGG---GGGGGGGGGGGGGAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETIL----------GIPLMYSILGLALFALVYSIVV------WTDVIQVFFLVLGGFMTTYMAVSFIGGTGWFAGVSKMVDAAPGHFEMILDQYMNLPGIAVLIGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITPSAANADKAYPWLTQF-LPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIACLIAPML-GGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFM-PLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDKGISVTSSMFVTDRSFNIAAYGIMIVLAVLYTLFWVL--YK------------------------------------------
2	SPARKS	2xq2a	0.258	0.911	11.108	threading_2	-SFIDIMVFAIYVAIIIGVGLWV-----------------SLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALET----------ILGIPLMYSILGLALFALVYSIYGGVV---WTDVIQVFFLVLGGFMTTYMAVSFIGGTDWFAGVSKMVDAAPGHFEMILDQSNNLPGIAVLIGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLALIVPFLVVLPGIAAYVITSDPQLMASKAYPWLTQFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIAALI-APMLGGIGQCFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKF-MPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPKGSVTSSMFVTDRSFNIAAYGIMIVLAVLYTLFW---VNADAEITLIIFGVMAGVIGTILLISYGIK---------------
3	PROSPECT2	3dh4A	0.253	0.858	5.100	threading_3	GGGG--------------------GGGGGGGGGGGGGAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETI----------LGIPLMYSILGLALFALVYSIVVWTDVIQVFFLVLGGFMTTYMAVSFIG-----GTDGWFAGVSKMVDAAPGHFEMILDQSNPPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITLPSAANADKAYPWLTQFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIACLIAPMLGG-IGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFL-KFMPLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDKGISVTSSMFVTDRSFNIAAYGIMIVLAVLYTLFW--------------------------------------------VLYK
4	PPA-I	3dh4A	0.264	0.856	4.047	threading_4	-----------------GGGG---GGGGGGGGGGGGGAGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETIL----------GIPLMYSILGLALFALVYSIVV------WTDVIQVFFLVLGGFMTTYMAVSFIGGTGWFAGVSKMVDAAPGHFEMILDQSNPQYIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITLPSAANADKAYPWLTQFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIACLIAP-MLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFM-PLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDKGISVTSSMFVTDRSFNIAAYGIMIVLAVLYTLFWVLYK--------------------------------------------
5	HHPRED-l	2xq2_A	0.268	0.900	10.177	threading_5	-SFIDIMVFAIYVAIIIGVGLWVS-----------------LPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILGIPLM----------YSILGLALFALVYSIYGG---VVWTDVIQVFFLVLGGFMTTYMAVSFIGGTGWFAGVSKMVDAAPGHFEMILDQSNPLPGIAVLIGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLALIVPFLVVLPGIAAYVILPSAANADKAYPWLT-QFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIAALIAPMLG-GIGQCFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMPL-SMPFMDQMLYTLLFTMVVIAFTSLSTSINDD--DPKGISVTSSMFVTDRSFAYGIMIVLAVLYTLFWVN---ADAEITLIIFGVMAGVILLISYGIK------------------
6	HHPRED-g	2xq2_A	0.267	0.900	8.570	threading_6	-SFIDIMVFAIYVAIIIGVGLWVS-----------------LPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLAL----------ETILGIPLMYSILGLALFALVYSIYGG---VVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAGSKMVDAAPGHFEMILDQSNNLPGIAVLIGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLALIVPFLVVLPGIAAYVILPSAANADKAYPWLT-QFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIAALIAP-MLGGIGQCFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMPL-SMPFMDQMLYTLLFTMVVIAFTSLSTSINDD--DPKGISVTSSMFVTDRSFAYGIMIVLAVLYTLFWVNA---DAEITLIIFGVMAGVIGTISYGIK------------------
7	SP3	2xq2a	0.256	0.911	10.905	threading_7	-SFIDIMVFAIYVAIIIGVGLWV-----------------SLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETIL----------GIPLMYSILGLALFALVYSIYGGVV---WTDVIQVFFLVLGGFMTTYMAVSFIGGTDVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLALIVPFLVVLPGIAAYVITSDPQLMASKAYPWLTQFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIAALI-APMLGGIGQCFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFM-PLSMPFMDQMLYTLLFTMVVIAFTSLSTSINDDDPKGSVTSSMFVTDRSFNIAAYGIMIVLAVLYTLFW---VNADAEITLIIFGVMAGVIGTILLISYGIK---------------
8	SAM-T99	3dh4A	0.301	0.744	11.244	threading_8	-------------------------------------AGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETIL----------GIPLMYSILGLALFALVYSI------VVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAGVSMVDAAPGHFEMILDQSNPQPGIAVLIGGWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDMASADKAYPWL-TQFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIACLIAPML-GGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKFMP-LSMPFMDQMLYTLLFTMVVIAFTSLS------------------------------------------------------------------------------------------
9	MUSTER	2jlnA	0.120	0.776	1.190	threading_9	---------------------------EARSLLNPSNAERSVGPFSLAAIWFAMAIQVAIF--IAAGQMTSSQVIVAIAAGCTIAVILLFFTQSAAIRW-GI-NFTVAARMPFGIRG-SLIPITLKALLSLFWFGFQTWLGALALDEITRLL------TGFTNLPLWIVIFGAIQVVTTFYGITFIRWMNVFASPVLLAMGVYMVYLMLDGADVS-----LGEVMSMG---------GENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPTKADARYATAQWLGMVPASIIFGFIGAASMVLVGEWN-----PVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCSTF-PRVFT-------FKTGVIVSAVVGLLMMPW---QFAGVLNTFLNLLASALGPLAGIMISDYFLVR------------------------RRRIS------------------LHDLYRTKGIYTY----------WRGVNWVALAVYAVALAVSFLTPDL--------MFVTGLIAALLLHIPAMRWVAKTFPLFSEAESRNEDYL
10	SPARKS	3dh4a	0.298	0.816	8.738	threading_10	-------------------------------------AGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETI----------LGIPLMYSILGLALFALVYS------IVVWTDVIQVFFLVLGGFMTTYMAVSFIGGTGWFAGVSKMVDAAPGHFEMILDQSNPLPGIAVLGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDAANADKAYPWLT-QFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIACLIA-PMLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTTSKGAIIGVVASIPFALFLKF-MPLSMPFMDQMLYTLLFTMVVIAFTSLSDPKGISVT-SSMFVTD----RSFNIAAYGIMIVLAVLYTLFWVLYK--------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.550 to 2q6hA SCOP code=f.54.1.1	TM-score=0.554 to 2q6hA SCOP code=f.54.1.1	TM-score=0.554 to 2q6hA SCOP code=f.54.1.1	TM-score=0.551 to 2q6hA SCOP code=f.54.1.1	TM-score=0.557 to 2q6hA SCOP code=f.54.1.1