Template-based Modeling Results for YICR_ECOLI

Submitted Primary Sequence

>Length 222
MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI
CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI
554223221112102521121021100000002212423301100220032111020012021310120311020100102000200220111213332212013001100122012333110000001242200101201222132021102200220031201000000001211231131021002101300310302000000003110001223224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI
1	MUSTER	2qlcA	0.310	0.568	1.842	threading_1	------------------------------------------------------------------------------------------------MNLKVKGARDVFEYMKGRIPDETKEHLFVLFLSTKNQILRHETITIGTLTASLIHPREIFKAAIRESAHSIILVHNHPSGDVQPSNADKQVTSILKKAGDLLQIELLDHVIVGNNDWFSFRDHALL
2	PROSPECT2	2yvtA	0.095	0.896	1.096	threading_2	PRRFDLLPKLKGVIAEKQPDIL-------VVVGNILKNEALEKEYERAHLARR----------------EPNRKVIHENEHYIIETLDKFFREIGELGVKTDAPLKIFLRAAYEAETAYPNIRVFAGWRGEFEVIGFGGLLTEHEFEEDFVVEYILKFVNELKPRRLVTIFYTPPIGEFPEDPKHHGSAVVNTIIKSLNPEVAGHELVGNTIVVEFEEGRFS
3	HHPRED-l	3c1y_A	0.121	0.410	1.385	threading_3	IMDYVEEETAQNILQDFITRREPSPISISRVLGYDVARIP-LSIGYNVVRMFKTLDQISKASVEDLKKVEGIGEKRARAI---SESISSLKHRKT-------------------------------------------------------------------------------------------------------------------------------
4	HHPRED-g	2bgw_A	0.239	0.396	1.434	threading_4	MNTMDPTREGGQRIVIHKKPRLSDVREWQLYILQSFPGIGR-RTAERILERFGSLERFFTASKAEISKVEGIGEKRAEEIKKILM-------TPYK------------------------------------------------------------------------------------------------------------------------------
5	SPARKS	2qlca	0.310	0.568	3.569	threading_5	------------------------------------------------------------------------------------------------MNLKVKGARDVFEYMKGRIPDETKEHLFVLFLSTKNQILRHETITIGTLTASLIHPREIFKAAIRESAHSIILVHNHPSGDVQPSNADKQVTSILKKAGDLLQIELLDHVIVGNNDWFSFRDHALL
6	SAM-T99	1x2iA	0.231	0.293	1.042	threading_6	-----LTLAERQRLIVEGLPHVS------------------ATLARRLLKHFGSVERVFTASVAELMKVEGIGEKIAKEIRRVITAPY--------------------------------------------------------------------------------------------------------------------------------------
7	PROSPECT2	2qlcA	0.317	0.568	2.553	threading_7	MNL------------------------------------------------------------------------------------------------KVKGARDVFEYMKGRIPDETKEHLFVLFLSTKNQILRHETITIGTLTASLIHPREIFKAAIRESAHSIILVHNHPSGDVQPSNADKQVTSILKKAGDLLQIELLDHVIVGNNDWFSFRDHALL
8	PROSPECT2	1q7mA1	0.146	0.928	1.046	threading_8	MRN----RREVSKLLSERV-LLLDGAYGTEFMKYGYDDLPEELNIKDVVLKV--HRSYIESGTRMKLRKHGLEDKLDPIVRNAVRIARRAAGEKLPYPLGSTLFEEFYENFRETVEIMVEEGVDGIIFSRDVFLIAHMTFDEKGRSLTGTDPANFAITFDELDIDALGINCSLGP---------EEILPIFQELSQYTDKFLVVEPNAGKPIVENYYELGVN
9	PPA-I	2qlcA	0.310	0.568	2.265	threading_9	------------------------------------------------------------------------------------------------MNLKVKGARDVFEYMKGRIPDETKEHLFVLFLSTKNQILRHETITIGTLTASLIHPREIFKAAIRESAHSIILVHNHPSGDVQPSNADKQVTSILKKAGDLLQIELLDHVIVGNNDWFSFRDHALL
10	HHPRED-l	1x2i_A	0.279	0.306	1.261	threading_10	--------------------ALTLAERQRLIV-EGLPHVSA-TLARRLLKHFGSVERVFTASVAELMKVEGIGEKIAKEIRRVIT-------APYIE-----------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.497 to 1oi0A SCOP code=c.97.3.1	TM-score=0.699 to 2yvtA SCOP code=d.159.1.6	TM-score=0.496 to 1oi0A SCOP code=c.97.3.1	TM-score=0.454 to 1xu4A SCOP code=a.60.4.1	TM-score=0.557 to 1x2iA SCOP code=a.60.2.5