Template-based Modeling Results for YICO_ECOLI

Submitted Primary Sequence

>Length 444
MNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMISNIPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDGNGKFPNMNKALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAIVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAALFALKIILVD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMISNIPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDGNGKFPNMNKALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAIVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAALFALKIILVD
CCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMISNIPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDGNGKFPNMNKALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAIVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAALFALKIILVD
553332322233210012003033311212100010001000000000000200010312231111000000000000000002000000001011000000000012010110000000000000000003011100220020021000000000000000220100011432111113021000000000000000010331200000000000000000121212111111121211102000210010100000000000100100000000023011232423122011000000000000100111101100100100222131011000100000000000000210121000000000000001201403132021000000000000000100100000000000020012314301100000000000100113
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMISNIPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDGNGKFPNMNKALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAIVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAALFALKIILVD
1	MUSTER	3qe7A	0.156	0.836	1.088	threading_1	-----------------RAIGVSER-PPLLQTIPLSLQHLFAMFGATVLVPVLF---HIN----PATVLLFNGIGTLLYLFICKG---IPAYLGSS--FAFPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKTGWLDVLPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQT----PDSK--TIIISITTLAVTVLGSVL-LAIPILIGVLVGYALSFAMGIVDTTPIINAH-AL-PTLYTP----RFEWFAILTILPAALVVIAEHVGHLVVTANIVK--KDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAI---TRTWVIGGAAIFAILLSCVGKLAMIPPVMGGVSLLLYGVIGASGIR-VDYNKAQNLILTSVILIIGVAELK---GMALATIVGIGLSLI---FKLIS------------------
2	SPARKS	3qe7a	0.157	0.847	1.199	threading_2	-----------------RAIGVSER-PPLLQTIPLSLQHLFAM-FGATVLVPVL--FHINPATVLLFNGIGTLLYLFICK--GKIPAYLGSS------FAFPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTP-------DSKTIIISITTLAVTVLGSVLFRGPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTP----RFEWFAILTILPAALVVIAEHVGHLVVTANIVKLLRDPG----LHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAI---TRTWVIGGAAIFAILLSCVGKLAAIPLPVMGGVSLLLYGVIGASESKVDYNKQNLILTSVILIIGVNIGAAELKGMALATIVGIGLSLI---FKLIS------------------
3	PROSPECT2	1jdha	0.096	0.937	1.729	threading_3	-------AVVNLIRAIPELTKLNDEDQVVVNKAAVMVHQLSASRHAIMRSPQMIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPA-------LVKMLGSPVDSVLFYA-ITTLHNLLLHQEGAKMAVRLAGNVKFLAITTDCLQILASKLIILASGGP---QALVNIMRTYTYEKLLWTTSRVLMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLNKMMVCQVGGIEALVRTVLRAGD----------REDITEPAICALRHLTSRHQEAEMAQNAPVVVKLLHPPSHWPLIKATVGLIRNLCPANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRNTIPLFVQLLYSPIENIQRVAAGVLCELAAAEAIEMS
4	PPA-I	3qe7A	0.142	0.854	1.874	threading_4	-----------------RAIGVSER-PPLLQTIPLSLQHLFAMFGATVLVPVLF-------HINPATVLLFNGIGTLLYLFICKG--KIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKTGWLDVLPPAAMGAIVAVIGLELAGVAAGMAG-------LLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTP----RFEWFAILTILPAALVVIAEHVGHLVVTANIVK--KDLLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAIPLPVMGGVSLLLYGVIGASESKVDYNKAQNLILTSVILIIGVAELKMALATIVGIGLSLIFKLIS-------------------------
5	HHPRED-l	3qe7_A	0.151	0.851	9.332	threading_5	-----------------RAIGVSERP-PLLQTIPLSLQHLFAMFGATVLVPVLF---HIN----PATVLLFNGIGTLLYLFICKGKI--PAYLGSSAFISVLLLLPL--GYEVALGGFIMCGVLFCLVSFIVGTGWLDVLFPPAA-------MGAIVAVIGLELAGVAAGMA-GLLPAETPDSKTIIISITTLAVTVLGSVRGFLAPILIGVLVGYALSFAMGIVDTTPIINAHWAL-PTLYTP----RFEWFAILTILPAALVVIAEHVGHLVVTANIVK---KDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMATRVYSTWVIGGAAIFAILLSCLAAAIQMIPLPVMGGVSLLLYGVIGRVLSKVDYNKAQNSVILIIGVSGAKVNIAAEKGMALATIVGIGLSLIFKLIS---------------------
6	HHPRED-g	3qe7_A	0.153	0.854	8.759	threading_6	-----------------RAIGVSERP-PLLQTIPLSLQHLFAMFGATVLVPVLF---HINP----ATVLLFNGIGTLLYLFICKGKI--PAYLGSSAFISVLLLLPL--GYEVALGGFIMCGVLFCLVSFIVGTGWLDVLFPPAA-------MGAIVAVIGLELAGVAAGMA-GLLPAETPDSKTIIISITTLAVTVLGSVRGFLAPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLY-T---PRFEWFAILTILPAALVVIAEHVGHLVVTANIVK---KDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMATRVYSTWVIGGAAIFAILLSCLAAAIQMIPLPVMGGVSLLLYGVIGSGIRKVDYNKILTSVILIIGVSGAKVNIGAEKGMALATIVGIGLSLIFK-LIS--------------------
7	SP3	3qe7a	0.174	0.840	0.562	threading_7	-----------------RAIGVSER-PPLLQTIPLSLQHLFAM-FGATVLVPVL--FHIN----PATVLLFNGIGTLLYLFIGKIPAY----LGSS--FAFPVLLLLPLGYEVALGGFIMCGVLFCLVSFIVKKGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAE-------GQTPDSKTIIISITTLAVTVLGSVLFRGPILIGVLVGYALSFAMGIVDTTPIINAHWAL-PTLYTPR----FEWFAILTILPAALVVIAEHVGHLVVTANIVKLLRDPG----LHRSMFANGLSTVISGFFGSTPNTTYGE-NIGVMA--ITRVTWVIGGAAIFAILLCVGKLAAIPLPVMGGVSLLLYGVIGASESKVDYNKAQNLILTSVILIIGVAKVNIGKGMALATIVGIGLSLI---FKLIS------------------
8	SAM-T99	3qe7A	0.156	0.878	1.345	threading_8	RAIGVSERPPLLQTIPLSLQHL------------------FAMFGATVLVPVLFHI---------ATVLLFNGIGTLLYLFICKGKIPA--YLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVSFIAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTP------DSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTPRFEWFAILTILPAALVVIAEHVGHLV---VTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGE-NIGVMAITRVYSTWVIGGAAIFAILLLAAAIQMIPPVMGGVSLLLYGVIGASGIRKVDYNKAQNLILTSVILII--------------GVSGAKVNIGAAELKGMALATIVGIGLSLI-FKLIS
9	MUSTER	1pw4A	0.125	0.881	0.848	threading_9	KPAPHKARLPAAE--IDPTY--RR----LRWQIFLGIFFGYAAYYLVRKNFALAMPYGFSRGFALSGISIAYGFSKFIMGSVS--RVFLPAGLILAAAVMLFMGFVPWATS-AVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVG-----------------------GGIPPLLFLLGMAWF-----HAALYMPAFCAILVALFADTPQSCGLPPIEEYKNDTAKQIFMQYVLPN---KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHF-ALDKSSWAYFLYEYAGIPGTL--LCGWM-SDK-VFRGNR-GATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLI-GLHALELAPKKAAGTAAGFT-GLFGYLGGSVAASAIVGYTVDFF--VMIGGSILAVILLIVVMIGE
10	SPARKS	1pw4a	0.104	0.910	0.932	threading_10	-FKPAPHKARLPAAEIDPTYR------RLRWQIFLGIFFGYAAYYLVRKNFALAMPYGFSRGDLLSGISIAYGFSKFIMGSVSDRRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFL--LGMAWFND-WHAALYMPAFCAILVALFAFAMMR-----------------DTPQSCGLPPIEEYKNDTAKQIFMQYVLNKLLWYIAIANVFVYLLRYGILDWSPTY---LKEVKHALDKSSWAYFLYEYAGIPGTLLC-GWMSDKV-------FRGNRGATGVFFMTLVTIATIVYWMNPA-GNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVFG-WDGGFMVMIGGSILAVILLIVVM

Predicted Tertiary Structure


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TM-score=0.421 to 2q6hA SCOP code=f.54.1.1	TM-score=0.382 to 1pv6A SCOP code=f.38.1.2	TM-score=0.400 to 2q6hA SCOP code=f.54.1.1	TM-score=0.629 to 1wa5B SCOP code=a.118.1.1	TM-score=0.409 to 2q6hA SCOP code=f.54.1.1