Template-based Modeling Results for YICL_ECOLI

Submitted Primary Sequence

>Length 307
MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGDKIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLVRKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARKINRPARHK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGDKIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLVRKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARKINRPARHK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGDKIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLVRKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARKINRPARHK
5523210000000000000000000100121130102000000000000000000002233212112213100000000000000000000000220111000001000000000000002323121110000000000000001322122100100000000000000000000011012311110000000000000000000221121101010000000000000000000002003202011000010010000000000001220100100000000000000213244423323322444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGDKIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTIIVAWFSLVRKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSISPAALFWGIASAFAAAFYTTYPSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLILAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILISMDSRRRARKINRPARHK
1	MUSTER	3zuxA	0.103	0.945	1.047	threading_1	ILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGP----YIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPEIAVGVILVGCCPTASNVMTYLA-RGNVALSVAVTSVSTLTSPLFLMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI-MESGLLIFAVVVLHNGIGYLLGFFAAKWTGLQKALTIEVGSGLAAALAAAHFAAAPVVPGALFSVWHNISGSLLATYWAAKA-----------
2	SPARKS	2x1gf	0.090	0.945	1.154	threading_2	GPKIVLNRLCISLGAYIVHMLGEEVINTFQNQRSADVQLWIMLEVLTAIPEEAQVIHTSVKRVVLRAEIAKR--------VQLVIHTVERYLKLQMNRVWDAEAYSNMNRAVKCVGTWIKN-IGYTIEGCVTITAVLLEVVHKCYWPCIHG---CMTADENELAESCLKTMVNIIIQPDCHNYPKTAFVLIKMFLDSLSEITKTEWKRENDNEDIIVHIYMLFVSSVERH--STLLLSGITSADPELSILVHRIVQEILHCTDKP--GIYPVEESCSTMALAFWYMLQDEVFAHKCWEYI-KPLYAH
3	PROSPECT2	3a6pA1	0.088	1.000	1.637	threading_3	AMDQVNALCEQLVKAVHFGLQILVMELIANGTLNILEEENHIKDALSRIVVEMIKREWPQHLDTLSKQGETQTELVMFILLRLAEDVVRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTAQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLLLNGAAECLLIAVSRKGKLEDRKPLMVLFVAMHYILSAAQTADGGGLVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLELRSSTQMTWGAEILSRDPLLLAIIPKYLRASMTNLVKMGFPSKTDSPSSTF
4	PPA-I	3zuxA	0.082	0.951	1.106	threading_4	---NILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPAEIAVGVILVGCGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI-MESGLLIFAVVVLHNGIGYLLGFFAAKWTGDAQKALTIEVGSGLAAALAAAHFAAAPVPGALFSVWHNISGSLLATYWAAKA-----------
5	HHPRED-l	3b5d_A	0.232	0.322	3.166	threading_5	----------------------------------------------------------------------------------------------------------------------------------------------------------------YLGGAILAEVIGTTLMKFSE---------------------------G----FTR---LWPSVGTIICYCASFWLLAQTLAYIPTGIAYAISGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS--------------
6	HHPRED-g	3b5d_A	0.214	0.319	3.259	threading_6	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YLGGAILAEVIGTLMKFSEGFT-RL--WPSVGTIICYCASFWLLAQTLAYIPTGIAYAISGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS--------------
7	SP3	3zuxa	0.124	0.945	0.566	threading_7	---NILSKISSFIGFSLWAALFAAAAFF--APDTFKWAGPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLNLPEIAVGVILVGCCPTASNVMTYLARGNVALAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI-MESGLLIFAVVVLHNGIGYLLGFFAAKWTGDAQKALTIEVSGLAAALAAAHFAAAPVVPGALFSVWHNISGSLLATYWAAKA-----------
8	SAM-T99	3b61A	0.287	0.329	0.868	threading_8	-----------------------------------------------------------------------------------------------------------------------------------AILAEVIGTTLMKFSEGFTRLWPSV---------------------------------------GTIICYCAS------------FWLLAQTLAYIPTGIAYAIW---------------SGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSRSTPH---------
9	MUSTER	1ezfB	0.082	0.951	0.787	threading_9	LSNSLKTCYKYLNQT----SFAAVIQAL--DGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQG---------REFWPQEVWSRYVKKLGDFAKPNIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNVATNMPAVKAIIYQYMEEIYHRIPDSKTRQIISTIRTQN
10	SPARKS	3m1ic	0.084	0.974	0.940	threading_10	LDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQ-DDEVFKTQKNLINKSDLTLVQILKQEPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSAEQMTQAKALHLKNSMSKEFEQIFKLCFQVEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELLSTKFMRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIATSVMPVTADLKATYANANGNDQSFLQDLAMFLTTYLARNRDESLRELLLNAHQYLIQLS-------KIEERELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQ

Predicted Tertiary Structure


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TM-score=0.428 to 1pw4A SCOP code=f.38.1.1	TM-score=0.430 to 2q7nB SCOP code=a.26.1.1	TM-score=0.633 to 1u6gC SCOP code=a.118.1.2	TM-score=0.613 to 1u6gC SCOP code=a.118.1.2	TM-score=0.428 to 1pv6A SCOP code=f.38.1.2