Template-based Modeling Results for YICJ_ECOLI

Submitted Primary Sequence

>Length 460
MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDAAEKAQNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRRCQQQFTSQEVQN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDAAEKAQNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRRCQQQFTSQEVQN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDAAEKAQNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRRCQQQFTSQEVQN
5543212222100000010000000000000000000100101000000000001001000000001001213142131200000000000000000000121120010000000000000000000000000002013222111101001100000000000000000021122323210110000000000000000001112222322322221220021013122000000000000000001000000000111111300100000000010000000310021201000000000000000000000112100000000000000110000000001010121011122321200000000001100100000000000100112123422222001001000000000000000000121020223103200320230254233322243245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDAAEKAQNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRRCQQQFTSQEVQN
1	MUSTER	1pv6A	0.127	0.874	1.366	threading_1	MYYLK---TNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL----GLRKYLLWIITGMLVMFAPFFI----FIFGPLLQYNILVGSIVGGIYGFCFNAGAPAVEAFIEKVSRRSNFFGRARMFGCVGWALGASIVGIMFTIN----NQFVFWLGSGCALILAVLLFFA--ATVANAVGANHSAFS-LKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFA--TSALEVVILKTLHMFEVPFLLVGCFKYITSQFE-------VRFSATIYLVCFCFKQLAMIFMSVLAGNMYESIG------------FQGAYLVLGLVALGFTLISVFTLSGPGPLS--LLRRQVNEVA-----------------
2	SPARKS	1pv6a	0.119	0.880	2.374	threading_2	--MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRK------YLLWIITGMLVMFAPFFIFIFGPLLQYNI-LVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFGRARMFG-CVGWALGASIVGIMFTI----NNQFVFWLGSGCALILAVLLFFASSATVANAVGANHSAFS-LKLALELFRQPKLWFLSLYVIGVSCTYDVFDQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIAPLIINRIGGKNALLLAGTIMSVRIIGSSFA--TSALEVVILKTLHMFEVPFLLVGCFKYITSQFE-------VRFSATIYLVCCFFKQLAMIFMSVLAGNMYESIGF--------QGAY---------LVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA--------------
3	PROSPECT2	1pw4A	0.120	0.885	2.322	threading_3	FKPAPAEIDPTYRR----LRWQIFLGIFFGYAAYYLVRKQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRV-----FLPAGLILAAAVMLFMGFVPWA--TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWH---AALYMPAFCAILVALFAFAMMRDTPQSIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV-------DFFGWDGGFMVM--------IGGSILAVILLIVV----------MIGEKRRHEQLLQELV------P
4	PPA-I	1pv6A	0.114	0.896	1.566	threading_4	--MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL----GLRKYLLWIITGMLVMFAPFFIF---IFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFFGRARMFGCVGWALGASIVGIMFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSF--ATSALEVVILKTLHMFEVPFLLVGCFKYITSQFE------VRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIG------------FQGAYLVLGLVALGFTLISVFTLSGPGPLS--LLRRQVNEVA-----------------
5	HHPRED-l	3o7q_A	0.112	0.837	4.712	threading_5	----RSYIIPFALLCSLFFLWAVANNLNDILL-PQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK----LSYKAG-IITGLFLYALGAALFAEIMN------YTLFLVGLFIIAAGLGCLETAANPFVTVLGPE-SSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHSLVLSVQTPYMIIVAIVLLVALLILTKFPALQSDNHKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGMAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA--GGHVGL-IALTLCSAFMSIQYPTIFSLGIKNLGQD--------TKYGSSFI-VMTIIGGGIVTPVMGFVSDAGNIPTAE----------------LIPALCFAVIFIFARF-RSQT-----------------------------
6	HHPRED-g	3o7q_A	0.104	0.835	4.330	threading_6	-----SYIIPFALLCSLFFLWAVANNLNDILL-PQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK----LSY-KAGIITGLFLYALGAALFAEIMN------YTLFLVGLFIIAAGLGCLETAANPFVTVLG-PESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHSLVLSVQTPYMIIVAIVLLVALLILTKFPALQSDNDKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG--GHVGL-IALTLCSAFMSIQYPTIFSLGIKNLG-------QD-TKYGSSFI-VMTIIGGGIVTPVMGFVSDAGNIPT-A---------------ELIPALCFAVIFIFARFRSQT------------------------------
7	SP3	1pw4a	0.133	0.885	2.387	threading_7	ARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYFALAMPYLQGFSRGDLGFALSGISIAYGFSKFIMGSVSD----RSN-PRVFLPAGLILAAAVMLFMGFVPWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMVHWW-SQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFND------WHAALYMPAFCAILVALFAFAMMRDTIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAAAIVGYTVDFFGWD----------------GGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP----------------
8	SAM-T99	1pw4A	0.155	0.867	1.108	threading_8	--YRRLRWQIFLGIFFGYAAYYLVRKNFA--LAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSN------RVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWF----GMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGG-----GIPPLLFLLGMAW-FNDWHAALYMPAFCAILVALFAFAMMRDTPLPPKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAP-------KKAAGTAAGFTGFGYLGGSVAASAIVGYTVDFFGWDGGF----------MVMIGGSILAVILLIVVMIG------EKRRHEQLLQEL------------------
9	MUSTER	1pw4A	0.128	0.867	1.348	threading_9	LPAAEIDLGIFFGYAAYYLVRK-NFALAMPYLV------QGFSRGDLGFALSGISIAYGFSKFIMGSVSD----RSN--RVFLPAGLILAAAVMLFMGFVPWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMVH---SQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFND----HAALYMPAFCAILVALFAFAMMRDTPQPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFG------------WDGGFMVMIGGSILAVILLIVVMIGE----KRRHEQLLQELVP----------------
10	SPARKS	1pw4a	0.131	0.893	2.322	threading_10	ARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLFALAMPYLGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNP-----RVFLPAGLILAAAVMLFMGFVPWATSS--IAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHA--ALYMPAFCAILVALFAFAMMRDTPQSPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA-------PKKAAGTAAGFTGLFGYLGGSVAAAIVGYTVDFFGWD-----------GGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP---------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.911 to 1pv6A SCOP code=f.38.1.2	TM-score=0.878 to 1pw4A SCOP code=f.38.1.1	TM-score=0.910 to 1pv6A SCOP code=f.38.1.2	TM-score=0.872 to 1pw4A SCOP code=f.38.1.1	TM-score=0.934 to 1pv6A SCOP code=f.38.1.2