Template-based Modeling Results for YICH_ECOLI

Submitted Primary Sequence

>Length 569
MKFIGKLLLYILIALLVAIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVLGTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINTEFSPQGVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANVPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSTEPVR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKFIGKLLLYILIALLVAIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVLGTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINTEFSPQGVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANVPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSTEPVR
CCEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEECCEECCCCCCCEEEEEEEEEEECHHHCCCCEEEEEEEEECCEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCEEECCCEECCCCCCCCCEEEEEECHHCEECCEEHHHEEEEEEECCCEEEEECCCHHHHCCEEEEEEEECCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCEEEEEEEEECCEEEECCCEEEEECCCCCCCCCCCCCEEEEEHHHCEECCEEEEEEEEEEEECCCCEEHHHHHHHHHCCEEEEEEEECCCCCEEEECCEEEECCEEECCCCHHHHHHHHCCHHHCCCEEEEEECCCEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEECCEEECCEEECCCEEEEEECCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCEEECCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKFIGKLLLYILIALLVAIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVLGTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINTEFSPQGVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANVPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSTEPVR
43120221220010002222122111112100300110033113220000001030211110001202024433322000100000000320232100000002202021233212121312100012110212223120102203000221112123211220101000210102401021000201033220101200020130200020111331212010010010103233102200211320210101201000020202200010010001102023222313302000102201111010110001010133101032010212211010201113332201012000100100033212200121012202202022010210000202230111000010202101001233100020101000230102300022010101023220101101021440101010101222433010101032020200221011302120101010102021313120210020202012244221211012010121323233338
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKFIGKLLLYILIALLVAIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVLGTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINTEFSPQGVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANVPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSTEPVR
1	MUSTER	2z64A	0.138	0.907	1.040	threading_1	IEVVPNITYQ----CLSKVPDIPSSTKN---------DLSFNPLKILKSYSFS-NFSELQWLDLSRIETIEDKAWHGLHLSNLILTFSPGSFSGLTSLENLVAVETKLASLESFPIGQLTLKKLFIHSCKLPAYFSNLTLVHVDLSYTITVNDLQFRENPQVNLSLDMSLNPIFIQDQAFQ------GIKLHELTLRGNSSNIMKTCLQNL------AGLHVHRLILGE--FKDERNLEIFPSIMEGLCDVTIDEFRLTYTNDFSDDVKFHCLAMSLAGVSIKYLEDVPKHFKWSLSIIRCQLKQFSLTLTMNKGSISFKKVALPSLSYDLSRNALSFSGCCSYSDGTNSLRHLDLSFNGAIIMSA--------NFMGLEELQ--HLDFQHSTLKRVTEFSAFLLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVF------ANTTNLTFLD--LSKCQLE---QISWGVFDTLRLLLNMSHNNLLFLDSSHYNQLYLS---TLDCSIETSKGILQHFPKSLA-FFNLTICEHQKFLQWVKKQFLVNVEMTCATPVE
2	SPARKS	1ziwa	0.157	0.905	1.207	threading_2	----------------------------------VSHEVADCSHLKLT-QVPDDLPTNITVLNLTHNQL-RRLPAANFQLTSLDVKLEPELCQKLPMLKVLNLQHNELSLSDKTFAFCTNLTELHLMSNSIQKIKNNPKQKNITLDLSLSSTKLGTQVQLENLQELLLSNNKIQ--ALKSEELDIFANSSLKKLELSSNQ-------IKEFSPGCFHAIGRLFGLFLNNVQL----GPSLTEKLCLELANTSIRNLSLSNSQLSTKWTNLTMLDLSYNNLNVVGNDSFAWLPQL----EYFFLEYNNIQHLFSH-SLHGRYLNLKRSFTKQLPKIDDFSFQWLKCLEHLNMEDNDIPGLKYLLSNSFTSLLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRRLMLRRVALKNVDSSPSPFQPLRNLTSNNNIANINDDMLELDLQHNNLRLWKHANPGGPIYFLKGLSHLHLNLESNFKDLFELKIDLGLNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKV
3	PROSPECT2	2cn2A	0.074	0.944	2.073	threading_3	VDNVVIGGGGGFPGIVFNETELLDHFQDEYSYY--------------GVESIATDPVDPNRVYIVAGYTNDWLPNGAILRSTEKTILPFKGGNPGRSGERLAIDPNSKVESFPNPGTIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNEVTWKAVPGQPKGLLPHHGVLASNGLYITYGDGKGQVWKFNTRTGEWIDITPIPSNAWWPDEYIFRSTDGTWKNIWERILHYEIDISAAPWLDWGTEKQLPEINPKLGWIGDIEIDPFNSDRYVTGATIYGCDNLTDWDRGGKVKIEVKATGIEECAVLDLVSLVSAVGDLVGFVHDDLKVGPKKSSGTGIDYAELVPNFALV--AKAVKKISFSYDGGRFQPPNEAPNSVGGGSVAVAADAKSVIWTPENASPA---VTTDNGNSWKVCTNLGGAV------VASDRVNGKKFYAFYNGKFYISTDGGLTFTDTKAPQLPK---SVNKIKAVPGKEGHVWLAAREGGLWRSTDGGYTFEKLSNVDTAHVVGFGKAAPGQDYA----IYITGKIDNVLGFFRSDDAGRINDDEHGYGAVAS
4	PPA-I	2pn5A1	0.128	0.889	1.476	threading_4	YKIT-----------IDGQRGFSF---------HKEAELVYLSKSISGLIQVDKPVFKPGTVNFRVIVLDTELKPPA-RVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAP---------------TPMLGVWNISVEVEGEELVSKTFEVKEYVLSTFDVQVMPSVIPLEEHQAVNLTIEANYHFGKP---------VQGVAKVELYLDDDKELTVYGKGQVELRFDNFAMDADQQDVPVKVSFVEQYTNRTVVKQSQI---TVYRYAYRVELIKESPQFRPGLPFKCALQFTHH--DGTPAKGISGKVEVSDVRFETTTTSD--NDGLIKLELQPSEGTEQLSIHFNAVDGFFFY-------EDVNKVETVTDAYIKLELKSPIKFMVTCTERMTFFVYYVMSKGNIIDAGFMRPNKQPKYLLQLNATEKMIPRAK----ILIATVAGRTVVYDFADLAFQELRNNFDLSIDEQEIKPIELSMSGRPYDKALLLFNKNHDLEFDIFHSLGLFARTLDDILFDSQESWLWKNVSIGRSGSRKLIEVVPDGFSIDPVYIKKPIQ
5	MUSTER	3s94A	0.112	0.910	1.031	threading_5	-----PLLLYDAAAVDFVFSHIYW---SDVSEEAIKQNV--VSGLL-SPDGLACDWSETNRIEVSNVLFWQEDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIINSEIYWP--------NGLTLDYEE-QKLYWADAKLNFI--HKSNLDGTNRQPFALTLFEDILYWTDW--THSILACNGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCG-SHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTDFTDIVLQLEDIRHVEGYIYWT--DDEVRAIRRSFIGSQFVVTAQIAHPDGIAVDWVARNLYWTDT---GTDRIEVTRLNGTMRKILISEDL------------EEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLG-WPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHITLLGDYVYWTDWQRRSIERVHKRS------AEREVIIDQLPDLMGLKATNVHRVIGSNPCAEENGGCSHLCLYRPQGLRCACPIGELISDMKTCIVP--
6	SPARKS	3a79b	0.126	0.822	1.184	threading_6	-------------------------------------------ESMVDYSNRNLTHVPKDALSLSQNSI-SELRMPDISLRVLRLSLDFHVFLFNQDLEYLDVSHNRLQ-NISCCPMA-SLRHLDLSFNDFDVLPVCKEFGNTFLGLSAAKFRQLDLLPVAHLSCILLDLVSYHIKGGETESLQI---PNTTVLHLVFHP----NSLFSVQVNMSVNA---LGHLQLSNIKLNDENRLMTFLSELTRGPTVTLQHIETTWKCSVFQFFWPRPVELNIYNLTIT-ERIDREEFTYS----ETALKSLMIEHVKNQVFLFSKEALYSVFA--------------EMNIKMLSISDTPFIH----------------MVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRL----QTLILQRNGLKNFFKVALMTKNMS-SLETLDVSLNSLNSHAYDRTCSILVLN--LSSNMLTGS-VFRCLPPKVKVLDLHNMSIPKDVTHLQALQELNVASN-QLKSVPDGVFDRLTSLQYWLHDPWDCTCPGIRYLSEWINKGVV-RNSAGSVAPDS
7	PROSPECT2	2pn5A1	0.103	0.902	1.912	threading_7	LSVLNVTKMVDVRRNMNRMINFNMPEDLTAGNYKITIDGQRGFSFHKEA-ELVYLSKSISGLIQVDKPVFKPGD--TVNFRVIVLDTELKPPARVKSVYTIRDPQRNVIRKWSTAKLYAGVFESDLQ-IAPTPMLGVWNISVEVEGEELVSKTFEVKEYVLSTFDVQVMPSVIPLEEHQAVNLTIEANYHFGKPVQ---------GVAKVELYLDDDKLKLKKELTVYGLRFDNFAM---------DADQQDV-PVKVSFVEQYTNRTVVKQSQITVY----------RYAYRVELIKESPQFRPGLPFKCALQFTHHDGTVEVSDVRFETTDGLIKLELQPSEGTEQLSIHFNAVDGFFFY-------------------EDVNKVETVTDAYIKLELKSPIKVYYVMSKGNIIDAGFMRPNKQPKYLLQLNATEKMIPRAKI----LIATVAGRTVVYDFADLAFQELRNNFDLSIDEQEIKPIELSMSGRPGAYDIGQVFDGFHENEFDIFHSLGLFARTLDDILFDSQESWLWKNVSIGRSGSRKLIEVVPSIDPVYGIIKKPIQ
8	PPA-I	2z2oC	0.120	0.441	1.240	threading_8	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEFKLQELNLTNQDTGSDKGKVWIT--QHKANMISCINLITEYPLPTPDAKVMCLTIS-SDGEVWFTENAANKIGRITKKG-IIK--EYTLPNP------------DSAPYGITEGPNGDIWFTEMNGN--RIGRITDDGKIREYELPNKGSYPSFITLGSDNALWF--TENQNNAIGRITESGDITEFKIPTPANDDALWFVEI---IGNKIGRITTSGEITEFK-------IPTPNARPHAITAGAGID--------------LWFTEWGANKIGRLTSNNIIEEYPIQIKSAEP
9	MUSTER	3v4pA	0.086	0.938	1.028	threading_9	LLYQGSVVLHSHGANRWLLVGTANWLANASVINPGAIYIGKNPGQTCEQLQLGSPCGKTCLEERDNLSRQPGENGSIVTCGHRWKNIFYIKNENKLPTGGCYGVPPDLRTELSKRIAPCYQDYVK--KFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYL-GYSVGAGHFRSQ--HTTEVVGGAPQHEQIGKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNFSDLLVGAPMQSTIREEGRVFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNL-GDIDNDGF----------EDVAIGAPQEDDLQGAIYI--YNGRA-DGISSTFSQRIEGLQISKSLSM-----FGQSISGQIDADNNGYVDVAVGAFRSDSAVLLRTRPVVIVDASLSHSVNRTKFDCVENGWPSVCIDL----TLCFSYKGKEVPGYIVLFYNMSLKAESPPRFYFSSNG------SDVITGSIQVSSANCRTHQAFMRKDVRDILTP-IQIEAAYHLGPHSTEEFPPLQPILQQKKEKDIMNFA
10	SPARKS	2z7xa	0.152	0.865	1.181	threading_10	CKGSSGSLN-------SIPSGLTEAVK--------SLDLSNNRITYISNSDLQ-RCVNLQALVLTSNGINTEDSFSSLGLEHLDLNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHKLQILRVGNMDTFTKIQRKDFFLEELEIDLQSYEPKSLKSIQNVSHLILHMKQHIL----LLEIFVDVTSSVECLELRDTDLD----TFHFSELSTGETNSLIKKFTFRNVKI-TDESLFQVMKLLNQISGL--LELEFDDCTLNGVGIDPGKVELTIRRLHIPRFYLFYDLSRITVENSKVFLVPCLLSQHLKSLELSENLMVEEYLKNSACEDA-------WPSLQTLILRQNHLAS-------------LEKTGETLLTLNLTNIDISKNSFHSMPETCQWP-----EKMKYLNLSSTRIHSVTGCIPK------TLEILDVSNNNLN-LFSLNLPQLKELY--ISRNKLMTLPDASLLPMLL-VLKISRKSVPDGIFDRL--TSLQ-------KIWLHTN-----PWDCSCP-RIDYLSRWLNKNSQKEQGSAKCSGSGKPVRSII

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.591 to 1xecA SCOP code=c.10.2.7	TM-score=0.932 to 1dabA SCOP code=b.80.1.7	TM-score=0.587 to 1xecA SCOP code=c.10.2.7	TM-score=0.714 to 2ebsB SCOP code=b.69.13.1	TM-score=0.445 to 1e0oB SCOP code=b.1.1.4