Template-based Modeling Results for YIBQ_ECOLI

Submitted Primary Sequence

>Length 319
MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPATVRVLQQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPATVRVLQQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN
CCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPATVRVLQQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN
5421210010000101012222101000000011132211110130202000000030220320022034221100010111122332233310223222320130021004201201000112002001222002300200232300001122112120120032120200211000132322220220022002104421000000001210030022002204330100101201322323222223322332232213113213233222302032002100320231210100111021113313223232235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPATVRVLQQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN
1	MUSTER	2qv5A	0.182	0.724	2.051	threading_1	LRPMEQYA-------RPWSGARGTRVAIVVGGLGLSQTGSQKAIRLPPEVTLGFAASGNSLQRWMQDARREGHEILLQIPLEPFGYPNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQSALEPVMRDIGKRGLLFLDDGSSAQSLSGGIAKAISAPQGFADVLLDGEVTEASILRKLDDLERIARRNGQAIGVASAFDESIAAISKWSREAGGGIEIVGVSALV---------------------------------------------------------------------------------
2	PROSPECT2	1ewka	0.123	0.991	1.264	threading_2	IREQYGIQRVEAMFHTLPVLLPNITLGSEIRDSCWHSSVALEQSIIRKPIAGVIGPGSSSAIQVQNLLQLFDIPQIAYSATSILSDKTLYKYFLRVVPSDTLQARAMLDIVKRYNWTYVSAVHTEGNYG--ESGMDAFKELAAQEGLCIAHYSNAGEKSFDRLLRKLRERLPKARVVVCFC-EGMTVRGLLSAMRRLGVVGEFSLIGSDGWADRDEVIEGYEVEANGGITIKLFDDYFLKLRLDTNTRNPWFLPGHLLENPNFKKVCTGNESLEENYVQDSKMGFVINAIYAMAHGLQNMHHALCPGHVGLCDAMKPID
3	PROSPECT2	1k6wa2	0.083	0.868	1.260	threading_3	WNQSGTLFEGIERWAERKALLTHDDVKQRA------WQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEPWIDLQIVAFPQEGILSYPN------------GEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDV------------------------HCDEIDDEQSRFVETVAALAHHEGMGARVTASHTYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRSGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQITHHSARTLNLQDYGIAAGNSAN
4	SPARKS	2qv5a	0.182	0.724	4.594	threading_4	LRPMEQYA-------RPWSGARGTRVAIVVGGLGLSQTGSQKAIRLPPEVTLGFAASGNSLQRWMQDARREGHEILLQIPLEPFGYPNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQSALEPVMRDIGKRGLLFLDDGSSAQSLSGGIAKAISAPQGFADVLLDGEVTEASILRKLDDLERIARRNGQAIGVASAFDESIAAISKWSREAGGGIEIVGVSALV---------------------------------------------------------------------------------
5	PROSPECT2	2qv5A	0.172	0.746	3.054	threading_5	LVVGADGLRPMEQYARPWSGARGTRVAIVVGGLGLSQTGSQKARDLPPEVTLGFAASGNSLQRWMQDARREGHEILLQIPLEPFGYPGPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQSALEPVMRDIGKRGLLFLDDGSSAQSLSGGIAKAISAPQGFADVLLDGEVTEASILRKLDDLERIARRNGQAIGVASAFDESIAAISKWSREAGGGIEIVGVSALV---------------------------------------------------------------------------------
6	PPA-I	2qv5A	0.182	0.724	3.148	threading_6	LRPMEQYA-------RPWSGARGTRVAIVVGGLGLSQTGSQKAIRLPPEVTLGFAASGNSLQRWMQDARREGHEILLQIPLEPFGYPNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQSALEPVMRDIGKRGLLFLDDGSSAQSLSGGIAKAISAPQGFADVLLDGEVTEASILRKLDDLERIARRNGQAIGVASAFDESIAAISKWSREAGGGIEIVGVSALV---------------------------------------------------------------------------------
7	HHPRED-l	2nly_A	0.294	0.661	8.958	threading_7	----------------------MKRAAIIIDDFGGDVKGVDDFLTGEIPVTVAVMPFLEHSTKQAEIAQAAGLEVIVHMPLEPK------PSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEVVKEKNAFIIDSGTSPHSLIPQLAEELEVPYATRSIFLDNHSSRKEVIKNMRKLAKKAKQGSEPIGIGHVGVRTYAGIRSMLDEFQASIQLVPVSQLLP--------------------------------------------------------------------------------
8	HHPRED-g	2nly_A	0.294	0.661	7.873	threading_8	----------------------MKRAAIIIDDFGGDVKGVDDFLTGEIPVTVAVMPFLEHSTKQAEIAQAAGLEVIVHMPLEPK------PSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEVVKEKNAFIIDSGTSPHSLIPQLAEELEVPYATRSIFLDNHSSRKEVIKNMRKLAKKAKQGSEPIGIGHVGVRTYAGIRSMLDEFQESIQLVPVSQLLP--------------------------------------------------------------------------------
9	SP3	2qv5a	0.181	0.746	4.626	threading_9	LPVVGADGLRPMEQYARWSGARGTRVAIVVGGLGLSTGSQKAIRDLPPEVTLGFAASGNSLQRWMQDARREGHEILLQIPLEPFGYPGPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQSALEPVMRDIGKRGLLFLDDGSSAQSLSGGIAKAISAPQGFADVLLDGEVTEASILRKLDDLERIARRNGQAIGVASAFDESIAAISKWSREAGGGIEIVGVSALV---------------------------------------------------------------------------------
10	SAM-T99	2qv5A	0.173	0.743	7.554	threading_10	VVGADGLRPMEQYARPWSGARG-TRVAIVVGGLGLSQGSQKAIRDLPPEVTLGFAASGNSLQRWMQDARREGHEILLQIPLEPFGYPNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQSALEPVMRDIGKRGLLFLDDGSSAQSLSGGIAKAISAPQGFADVLLDGEVTEASILRKLDDLERIARRNGQAIGVASAFDESIAAISKWSREAGRGIEIVGVSALV---------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.764 to 2nlyA SCOP code=c.6.2.7	TM-score=0.705 to 1ewtA SCOP code=c.93.1.1	TM-score=0.764 to 2nlyA SCOP code=c.6.2.7	TM-score=0.699 to 2gokA SCOP code=b.92.1.10	TM-score=0.764 to 2nlyA SCOP code=c.6.2.7