Template-based Modeling Results for YIBH_ECOLI

Submitted Primary Sequence

>Length 378
MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLILLMNYNHPYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSILPVVPGGSYQAQGVLQSLTVVPGTDGVLGTIELDPNDDIDALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLYLDH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLILLMNYNHPYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSILPVVPGGSYQAQGVLQSLTVVPGTDGVLGTIELDPNDDIDALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLYLDH
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEEEEEEECCCCEEEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCEEECCCCCEEEEEEECCCEEEEEEECHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLILLMNYNHPYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSILPVVPGGSYQAQGVLQSLTVVPGTDGVLGTIELDPNDDIDALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLYLDH
532110000000000002003010110000000000000000000001110210220111000020003120101101032222024110002013231111023011102201320321211012021102201111221131121123023232331123102202410211111030012212211221222121221101102110120112132010101120100101033111001222110000011331100010222002303312202000101222202010100131122122313221321201212100100010133332320230010100010332210000120000000110000125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLILLMNYNHPYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSILPVVPGGSYQAQGVLQSLTVVPGTDGVLGTIELDPNDDIDALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLYLDH
1	MUSTER	3fppB	0.226	0.680	1.690	threading_1	------------------------------------------------RDLQQSVLKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVID--------------PEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQT--QAVS--------------QQDLDNAATEMAVKQAQIG----TIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTP---------EKVND-----AIFYYARFEVPNPNGL--LRLDMTAQVHIQLTDVK-----------------------
2	SPARKS	3fppa	0.212	0.698	3.980	threading_2	---------------------------------------------PGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME--------------LRAQRQQAEAELKLARVTYSRQQRLAQTQ--AVSQQDLDNAATEMAVKQAQIGTIDAQIKR------------------NQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPT---------PEKVND-----AIFYYARFEVPNPN--GLLRLDMTAQVHIQLTDVKNVLT-------------------
3	PROSPECT2	3fppA	0.219	0.677	3.233	threading_3	---------------------------------------------------PGDLQQSVLATKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME--------------LRAQRQQAEAELKLARVTYSRQQRLAQT--QAVSQQDLDNAATEMAVKQAQIGTIDAQ------------------IKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPE----------------KVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVK---------------------NT
4	PPA-I	3fppB	0.189	0.685	2.504	threading_4	--------------------------------------------------RPGDLQKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQ----------------AVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYT------------------RIVAPMAGEVTQITTLQGQTVIAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPT----------------PEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLT-------------------
5	HHPRED-l	3fpp_A	0.205	0.696	4.435	threading_5	---------------------------------------------PGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQ--------------RQQAEAELKLARVTYSRQQRLAQTQAVS--QQDLDNAATEMAVKQAQI------------------GTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVN--------------DAIFYYARFEVPNPNG--LLRLDMTAQVHIQLTDKNVLT--------------------
6	HHPRED-g	3fpp_A	0.211	0.690	4.550	threading_6	---------------------------------------------PGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME--------------LRAQRQQAEAELKLARVTYSRQQRLAQT--QAVSQQDLDNAATEMAVKQAQIGTIDAQIK------------------RNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIA--AQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKV---------N-----DAIFYYARFEVPNP--NGLLRLDMTAQVHIQLTDVKNLT--------------------
7	SP3	3fppa	0.205	0.698	3.919	threading_7	---------------------------------------------PGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME--------------LRAQRQQAEAELKLARVTYSRQQRLA--QTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKR------------------NQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVL----------PTPEKVNDAIF----YYARFEVPNPN--GLLRLDMTAQVHIQLTDVK--NVLT-----------------
8	SAM-T99	3fppB	0.239	0.619	4.327	threading_8	---------------------------------------------------------------VDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLM--------------ELRAQRQQAEAELKLARVTYSRQQRL--AQTQAVSQQDLDNAATEMAVKQAQIGTI------------------DAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVI--AAQNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLP--------------TPEKVNDAIFYYARFEVPNPNG--LLRLDMTAQVHI-----------------------------
9	MUSTER	3lnnA	0.178	0.757	1.348	threading_9	----------ALR----RL-VVPAESPLRRTLAVAPATR---------ETVAAPFNAMIEADLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD-------------------------LAQANSDAAKARAAMTMARRNLDRQRELDKSE--IAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGGH----------------ILAVRSPINGRVVDLNAATGAYWND-TTASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDDP-QPGKVRYVGQILDA---------DTRT-------TKVRMVFDNPD--GRLRPGMFAQATFLSQPHEGIVVPMSAIVQ-----TRAFVEV
10	SPARKS	3lnna	0.165	0.704	2.789	threading_10	------------------------------------------------ALRHEGERAMIEADLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD-------------------------LAQANSDAAKARAAMTMARRNLDRQREL--DKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGG----------------HILAVRSPINGRVVDLNAATGAYWND-TTASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDDP-QPGKVRYVGQILDA---------DTR-------TTKVRMVFDNPDGR--LRPGMFAQATFLSQPHEGIVVPMSAIVQSGFY-TRAFVEV

Predicted Tertiary Structure


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TM-score=0.491 to 1iyuA SCOP code=b.84.1.1	TM-score=0.475 to 2r2vA SCOP code=h.1.3.1	TM-score=0.462 to 1gjxA SCOP code=b.84.1.1	TM-score=0.486 to 1iyuA SCOP code=b.84.1.1	TM-score=0.461 to 1iyuA SCOP code=b.84.1.1