Template-based Modeling Results for YIAT_ECOLI

Submitted Primary Sequence

>Length 246
MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENTKAIPLISYEGDTFYVRQTTLGFILSQSEKNELSLTASWMPLEFDPTDNDDYAMQQLDKRDSTAMAGVAWYHHERWGTVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGVLYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYSELPEEITDSPMIDRNESFTFVTGVSWRF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENTKAIPLISYEGDTFYVRQTTLGFILSQSEKNELSLTASWMPLEFDPTDNDDYAMQQLDKRDSTAMAGVAWYHHERWGTVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGVLYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYSELPEEITDSPMIDRNESFTFVTGVSWRF
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEEEECCEEEEECCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEEEECCEEEEEEEEEECCCCCCCEEEEEEEEEEEECCCEEEEEEEEEEEECCCCEEEECCCCHHHHHHCCCCCCCCCCEEEEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCCEEECCEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENTKAIPLISYEGDTFYVRQTTLGFILSQSEKNELSLTASWMPLEFDPTDNDDYAMQQLDKRDSTAMAGVAWYHHERWGTVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGVLYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYSELPEEITDSPMIDRNESFTFVTGVSWRF
431110100000000001122220000000000211242342101000000020210002112000000223301000000001231322333221024033231101000001011310101010001023212010010000010212301000000000114210000010221103312122120420000001000101013200000000011024313302001222101000000031
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENTKAIPLISYEGDTFYVRQTTLGFILSQSEKNELSLTASWMPLEFDPTDNDDYAMQQLDKRDSTAMAGVAWYHHERWGTVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGVLYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYSELPEEITDSPMIDRNESFTFVTGVSWRF
1	MUSTER	2x27X	0.164	0.793	0.973	threading_1	--------------DIQGHKAGDFIIRGGFATVDPDDSSSD--------IKLDG----AKQRGTKATV---SDTQLGLTFTYMFAD-----------------KWGVELVAATPFNHQ-VDVKGLLDGKLADIKQLPPTLLLQYYPMGGTNSAFQPYGGLGVN---YT-TFFDEDASNRKAQGFSSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIALGVNKTKVDVDVDPWVYMIGFGYKF
2	SPARKS	2f1ta	0.104	0.663	1.167	threading_2	---------------------------------------------------------------------EAGEFFMRAGSATVRPTEGGGFS----------VTNNTQLGLTFTYMATDLLAATPFRHKIGTRATGDIATVHHLPPTLMASSKFRPYVGAGIN----YTTFFDNGNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDINYKLGGAQQHDSVRLWVFMFSAGYRF
3	PROSPECT2	1uynX	0.139	0.907	1.483	threading_3	STAAHADMQGRRLKAVSDGLDHNRVIAQTQQDGGTWEQGGVEGKMRGSTQTTGENTTAAATLGMGRSTWSENSANAKTDSISLFAGIRHDAGDI----------------GYLKGLFSYGRYKNSISRSTGADENGTLMQLGALGGVNVPTGDLTVEGGLRY-------DLLKQDAFAEKGSALGWSGNSLTEGGLAGLKLSQPLSDKAVLFATAGVERDLNGRDTGPHTRLVGNHSGRVGVGYRF
4	PPA-I	2k0lA	0.099	0.736	1.968	threading_4	-------------------------------------------------------ARIMKAIFVLNAAPKDNTWYAGGKLGWSQYHDTGFYGNGFQNNNGPTRNDQLGAGAFGGYQVNYLGFEMGYDWVDNGAFKAQGVQLTAKLGYPITDLDIYTRLGGMVWRADSKGNY--------ASTGVSRSEHDTGVSPVFAGGVEWAVTRDIATRLEYQWVNNIGDAGTVGT--RPDNGMLSLGVSYRF
5	HHPRED-l	3nb3_A	0.128	0.541	2.745	threading_5	-------------------ADNTWYTGAKLGWSQ------------------HENKLGA-GAFGGYQVN--PYVGFEMGYDWL--GRM-PY---------------------------------------AYKAQGVQLTAKLGYPI-TDDLDIYTRLGGMVWRADTYSNVYG-------------KNHDTGVSPVFAGGVEYAITPEIATRLEYQWTN----------------GMLSLGVSYR-
6	HHPRED-g	3nb3_A	0.134	0.545	2.756	threading_6	-------------------KDNTWYTGAKLGWSQ------------------HENKLGA-GAFGGYQVNP--YVGFEMGYDWLGR--M-PY---------------------------------------AYKAQGVQLTAKLGYPI-TDDLDIYTRLGGMVWRADTYSNVYG-------------KNHDTGVSPVFAGGVEYAITPEIATRLEYQWTN----------------GMLSLGVSYRF
7	SP3	2f1ta	0.155	0.707	1.121	threading_7	-------------------EAGEFFMRAGSATVPTEGGGFSVTNNTQLGLTFT--YMATD--NIGVELLAATPFRHKIGT-----------------RAT---------GDIATVHHLPPTLMAQWY---FGDASSK----------------FRPYVGAGIN----YTTFFDNGNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDINYKLGGAQQHDSVRLWVFMFSAGYRF
8	SAM-T99	2i71B1	0.124	0.691	0.505	threading_8	-RDLLKVDKTVVILGISVASKNDLGISESYVVAPNVYQKFKGKPDYFTYIYYHSLRVFIDTTGINYGVLAKEAIQLAVSAYADPVGKDVSDT--VKLHEIEAIKISPLSGLKY------------VTYQILNKDKNFFNKIFSDSVNAIRFATALDNGLFIYLSEK---------------------------------------------DSSLHLKRLEDDLSKDPLL----------------
9	MUSTER	2qomB	0.123	0.927	0.906	threading_9	-NLNKRMAWARIMSGTGSASGGFSDNYTHVQVGVDKKHELGLDLFTGFTVTHTDSSASADVAGLYASAMFDSGAYIDLIGKYVHHDNEYTATFATR----DYSTHSWYAGAEAGYRYHYGSVSGKQFAWKDGMHNPLIGRTGVDVGKSFGKWKVTARAGLGYQ----FDLLANGETVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKY---------NVDNAVNANFRYSF
10	SPARKS	3kvnx	0.146	0.919	1.132	threading_10	AYQDELRSQWQADWENWQNVGQWRGFVGGGGQRLDFDSQDSAA----------SGDGNGYNLTLGGSYRIDEAWRAGVAAGFYRQKLEAGAKDSDY-----RMN-SYMASAFVQYQENRWWADAALTGGYLDALGGWAFSARLGYDIAQQPWHLSPFVSADYARVEVD----GYSEKGASATALDYDDQKSSKRLGAGLQGKYAFGSDTQLFAEYAHEREYEDLNSLPYTPQDHLNRVSLGFSQKL

Predicted Tertiary Structure


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TM-score=0.655 to 1p4tA SCOP code=f.4.1.1	TM-score=0.556 to 1p4tA SCOP code=f.4.1.1	TM-score=0.570 to 1p4tA SCOP code=f.4.1.1	TM-score=0.713 to 1uynX SCOP code=f.4.5.1	TM-score=0.544 to 1p4tA SCOP code=f.4.1.1