Template-based Modeling Results for YIAO_ECOLI


  Submitted Primary Sequence

>Length 328
MKLRSVTYALFIAGLAAFSTSSLAAQSLRFGYETSQTDSQHIAAKKFNDLLQERTKGELKLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLDVPFLFRDTAHAHKTLDGKVGDDLKASLEGKGLKVLAYWENGWRDVTNSRAPVKTPADLKGLKIRTNNSPMNIAAFKVFGANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAKFFEVQKFLSLTHHAYSPLLVVINKAKFDGLSPEFQQALVSSAQEAGNYQRKLVAEDQQKIIDGMKEAGVEVITDLDRKAFSDALGNQVRDMFVKDVPQGADLLKAVDEVQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLRSVTYALFIAGLAAFSTSSLAAQSLRFGYETSQTDSQHIAAKKFNDLLQERTKGELKLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLDVPFLFRDTAHAHKTLDGKVGDDLKASLEGKGLKVLAYWENGWRDVTNSRAPVKTPADLKGLKIRTNNSPMNIAAFKVFGANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAKFFEVQKFLSLTHHAYSPLLVVINKAKFDGLSPEFQQALVSSAQEAGNYQRKLVAEDQQKIIDGMKEAGVEVITDLDRKAFSDALGNQVRDMFVKDVPQGADLLKAVDEVQ
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEECHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCHHHHHHCCHHHHCCEEEECCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLRSVTYALFIAGLAAFSTSSLAAQSLRFGYETSQTDSQHIAAKKFNDLLQERTKGELKLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLDVPFLFRDTAHAHKTLDGKVGDDLKASLEGKGLKVLAYWENGWRDVTNSRAPVKTPADLKGLKIRTNNSPMNIAAFKVFGANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAKFFEVQKFLSLTHHAYSPLLVVINKAKFDGLSPEFQQALVSSAQEAGNYQRKLVAEDQQKIIDGMKEAGVEVITDLDRKAFSDALGNQVRDMFVKDVPQGADLLKAVDEVQ
4412100100000000000001221210200130132111110022012102431402020100121211313100100310101000000220122121010010000041121012001130022012103221020000021112100013121321211320201012030001003102111020101200200222112012010200111201201300011110100000000122033023301300220032003101310231133002003512121013211310031002302310141032013013003413
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKLRSVTYALFIAGLAAFSTSSLAAQSLRFGYETSQTDSQHIAAKKFNDLLQERTKGELKLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLDVPFLFRDTAHAHKTLDGKVGDDLKASLEGKGLKVLAYWENGWRDVTNSRAPVKTPADLKGLKIRTNNSPMNIAAFKVFGANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAKFFEVQKFLSLTHHAYSPLLVVINKAKFDGLSPEFQQALVSSAQEAGNYQRKLVAEDQQKIIDGMKEAGVEVITDLDRKAFSDALGNQVRDMFVKDVPQGADLLKAVDEVQ
1MUSTER3b50A0.2870.9243.092threading_1-----------------------ADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKALFTEFGKDLIKKMDKDGVTLLSQAYNGTRQTTSN-RAINSIADMKGLKLRVPNAATNLAYAKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYLVSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVTFFEKQGVKI-THPDLVPFKESMKPYYAEFVKQTGQKGESALKQIEAIN
2SPARKS3gyya0.2590.8965.574threading_2-------------------------DNWRYAHEEYEGDVQDVFAQAFKGYVEDNSDHT--VQVYRFGELG----IMEQTQNGILQFVNQSPGFTGSLIPSAQIFFIPYLMTDMDTVLEFFDESINEMFPKLYAEHGLELLKMYPEGEMVVTA-DEPITSPEDFNK-KIRTMTNPLLAETYKAFGATPTPLPWGEVYGGLQTGIIDGQENPIFWIESGGLYEVSPNLTFTSHGWFTTAMMANQDFYEGLSEEDQQLVQDAADAAYDHTIEHIKGLSEESLEKIKAASVTRLNDEQIQAFKERA-PQVEEKFIEMGEQGQELLDQFKADL
3PROSPECT23fxbA0.2840.9124.612threading_3DT-------------------------WRYAFEEAMTDVQGVYAQKFKEEIEANSDHE--IQLFPYGTLGESADIMEQTQDGILQFVDQSPGFTGSLIPEAQVFFVPYLLPTDQDHLAFKESKAINDMFKPYADQGLELLNMFPEGEVAMTTK-TPVTTCSDLDEVKFRVMTNPLLVESYKAFGATPTPLPWGEVYGGLQTNVIQGQENPTFFLYSTKIYEVTDYITYAGHNNFTTAVMANKDFYDGLSAEDQQLVQNAALAAYDHTVVYQQQAADTELAKIMEAKVTVLTDEQRSCFKEAA-AEVEAKFIEMTDSGAAILKQMKADT
4PPA-I3b50A0.2840.9245.234threading_4-----------------------ADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKALFDEFGKDLIKKMDKDGVTLLSQAYNGTRQTTS-NRAINSIADMKGLKLRVPNAATNLAYAKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYLVSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVTFFEKQGVKITH-PDLVPFKESMKPYYAEFVKQTGQKGESALKQIEAIN
5HHPRED-l2zzv_A0.2030.9184.838threading_5-----------------------RRYRWRIQTAWDAGTVGYSLFQKFTERVKELTDGQLEVQPFPAGAVVGTFDMFDAVKTGVLDGMNPFTLYWAGRMPVTAFLSYALGLDRPDQWETWFYSLGGDIARRAFAEQGLFYVG-PVQHDLNIIHSKKPIRRFEDFKGVKLRVPG-GMIAEVFAAAGASTVLLPGGEVYPALERGVIDAADFVGPAVYNLGFHQVAKYIIMGEHQPDLMDFTINLNRWRSLPKPLQERFIAAVHEYSWIHYAGIQKANLEAWPKYRQAGVEVLSNEDVRKFRRLAI-PIWFKWAKMDKYSREAFASQLEY-
6HHPRED-g2xwv_A0.3010.9214.219threading_6-----------------------ADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKALDTEFGKDLIKKMKDLGVTLLSQAYNGTRQTTS-NRAINSIADMKGLKLRVPNAATNLAYAKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYLVSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVTFFEKQGVKITHP-DLVPFKESM-KPYYAEFVKQTGQGESALKQIEAIN
7SP33gyya0.2550.8965.877threading_7-------------------------DNWRYAHEEYEGDVQDVFAQAFKGYVEDNSDHT--VQVYRFGELG----IMEQTQNGILQFVNQSPGFTGSLIPSAQIFFIPYLMTDMDTVLEFFDKAINEMFPKLYAEHGLELLKMYPEGEMVVTA-DEPITSPEDFNK-KIRTMTNPLLAETYKAFGATPTPLPWGEVYGGLQTGIIDGQENPIFWIESGGLYEVSPNLTFTSHGWFTTAMMANQDFYEGLSEEDQQLVQDAADAAYDHTIEHIKGLSEESLEKIKAASDTRLNDEQIQAFKERA-PQVEEKFIEMGEQGQELLDQFKADL
8SAM-T993b50A0.2970.9156.509threading_8-----------------------ADYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKALDTEFGKDLIKKMKDLGVTLLSQAYNGTRQTTSN-RAINSIADMKGLKLRVPNAATNLAYAKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYLVSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVTFFEKQGVKITH-PDLVPFKESM-KPYYAEFVKQT--GQKGESALKQIE
9MUSTER2pfzA0.2210.9122.960threading_9-------------------------TKWDLPTAYPASNLHVENLTQFVKDVDSLSGGKLKITLHNNASLYKAPEIKRAVQGNQAQIGEILLTNFANEDPVYELDGLPFLATGYDASFKLYQ-AQKPFLEKKLASQGMMLLYSVAWPPQGIFA-NRDIKQVSDMKGLKWRAY-SPVTAKIAELVGAQPVTVQQAELAQAMATGVIDSYMSSGSTGFDTKTYEYIKKFYDTEAWLPKNAVLVNKKAFDALDPATQQALKKAGAQAEERGWKLSQEKNSWYKEQLAKNGMAIITAELKSGLTEVGKRMLDDWLKKAGADGQAMIDAYRKQ-
10SPARKS2cexa0.2990.9185.242threading_10------------------------DYDLKFGMNAGTSSNEYKAAEMFAKEVKEKSQGKIEISLYPSSQLGDDRAMLKQLKDGSLDFTFAESARFQLFYPEAAVFALPYVISNYNVAQKALDTEFGKDLIKKMDKDGVTLLSQAYNGTRQTTS-NRAINSIADMKGLKLRVPNAATNLAYAKYVGASPTPMAFSEVYLALQTNAVDGQENPLAAVQAQKFYEVQKFLAMTNHILNDQLYLVSNETYKELPEDLQKVVKDAAENAAKYHTKLFVDGEKDLVTFFEKQGVKI-THPDLVPFKESM-KPYYAEFVKQGQKGESALKQIEAIN

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.600 to 1ii5A
SCOP code=c.94.1.1
TM-score=0.601 to 1ii5A
SCOP code=c.94.1.1
TM-score=0.586 to 1ii5A
SCOP code=c.94.1.1
TM-score=0.585 to 1ii5A
SCOP code=c.94.1.1
TM-score=0.599 to 1ii5A
SCOP code=c.94.1.1