Template-based Modeling Results for YIAN_ECOLI

Submitted Primary Sequence

>Length 425
MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMAQTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAMIMASLSGSAVADTAAVAALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFGVSSGLSISKLFMAGIAPGMMMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIWALFLPVIIIGGFRSGLFTPTEAGAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTSVVMFLVASAQVSAWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAILIVGMVMDLTPTVLILTPVLMPLVKEAGIDPIYFGVMFIINCSIGLITPPIGNVLNVISGVAKLKFDDAVRGVFPYVLVLYSLLVVFVFIPDLIILPLKWIN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMAQTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAMIMASLSGSAVADTAAVAALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFGVSSGLSISKLFMAGIAPGMMMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIWALFLPVIIIGGFRSGLFTPTEAGAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTSVVMFLVASAQVSAWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAILIVGMVMDLTPTVLILTPVLMPLVKEAGIDPIYFGVMFIINCSIGLITPPIGNVLNVISGVAKLKFDDAVRGVFPYVLVLYSLLVVFVFIPDLIILPLKWIN
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMAQTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAMIMASLSGSAVADTAAVAALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFGVSSGLSISKLFMAGIAPGMMMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIWALFLPVIIIGGFRSGLFTPTEAGAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTSVVMFLVASAQVSAWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAILIVGMVMDLTPTVLILTPVLMPLVKEAGIDPIYFGVMFIINCSIGLITPPIGNVLNVISGVAKLKFDDAVRGVFPYVLVLYSLLVVFVFIPDLIILPLKWIN
22001100000000001000000000000000010110202000210020012000000000000010021010021002001100011210000000000000010100100000000000011033241222100000000011221000000000000012121120010010000000000000000101323223334121220020001001000000000000100000001000000000000000113212121012001000200000000000010001002112111000210231231110000000000000000021000000000000100330201100000000000000100010000000000013030220021001000000000000000010010014115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMAQTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAMIMASLSGSAVADTAAVAALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFGVSSGLSISKLFMAGIAPGMMMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIWALFLPVIIIGGFRSGLFTPTEAGAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTSVVMFLVASAQVSAWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAILIVGMVMDLTPTVLILTPVLMPLVKEAGIDPIYFGVMFIINCSIGLITPPIGNVLNVISGVAKLKFDDAVRGVFPYVLVLYSLLVVFVFIPDLIILPLKWIN
1	SPARKS	2bkub	0.118	0.960	1.084	threading_1	ASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLDDDWNVSMSAGACLQLFAQNCGILEPVLEFVEQNITADN---WRNREAAVMAFGSIMGPDKVQRTYYVHQALPSILNLMNDETTAWCIGRIADSVAESIDPQLPGVVQACLIGLQDH--------PKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDGLIGAEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKDDVFYAISALAASLGKGFEKYLETF---SPYLLKALNQVDSPVSITAVGFIADISNSLFRRYSDAMMNVLAQMISNP--NARRELKPAVLSVFGDIASNI-GADFIPYLNDIMA
2	PROSPECT2	1jdha	0.099	0.972	2.036	threading_2	RSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALPVDSVLFYAITTLHNLLLHQEGAKMAVRLGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILAALVNIMRTYTYEKLLWTTSRVLKVLSVC--SSNKPAIV----EAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA------LRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLRAIPRLVQLLVRAEGVRMEEIVEGCTGALHILARDVHNRIVILFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAYAAAVLFRMS
3	PPA-I	3g61A1	0.057	0.699	1.133	threading_3	TLAAIIHGVALPLMML-IFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVL---IVAYIQVSFWCLA-----AGRQIHKIRQKFFHAIMNQLTDDVSKINEGIGDKIGM----FFQAMATFFGGFIIGFTRIGQVLTVFFSVLI--GAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSGW--QLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENEQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVTQQLMT---------------------------------------------------------------------------------------------------------------
4	HHPRED-g	3o7q_A	0.122	0.852	1.172	threading_4	SYIIPFALLCSLFFLW----AVANNLNDIPQFQQAFTLTNFQ--AGLIQS--AFYFGYFIIPIPAGILMKKLSY-KAGIITGLFLYALGAALFNYTLFLVGLFIIAAG---LGCLETAANPFVTVLGPE-SSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHSVQTPYMIIVAIVLLV----ALLIMLTKFPALQSDNKQGSFSASLSRLRIHWRWAVLAQFCYV------------GAQTACWSYLIR-YAVEEIGMTAGFAANYLTGTMVCF----FIGRFTGTWLISRFAPHKMALCLISAFAGGHVGL-----IALTLCSAFMSI------QYPTIFSLGIKNL--GQDTKYGSSFIVIGGGIVTPVMGFVSDA----------AGNIPTAELIPALCFAVIFIFA----RFRSQT--
5	SPARKS	2xwub	0.110	0.981	1.081	threading_5	IPLVLGLQEQLRQAVQNGDMETSHGICRIAVALGENHSRFLALVNMIMFCTGTSSLTLTFWYTLQDDILSFEAYRPVYFQLVDVLLHKAQFQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSYSWQHTEALLYGFQS-IAETIDVNVVPGLIGLIPRISISN-------VQLADTVMFTIGALSEWLADHPVMINSVGNPELSVSSVSTLKKICRCKYDLPPYAANIVAVSQDVLSQCMWLMQALGFLLSALQVEEILKNLHSLISPIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDISVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLTRQLVHIAHFPPIEALFLLVTSVTLTLFQPRDHPDIVDSFMQLLA
6	PROSPECT2	1b3ua	0.122	1.000	2.015	threading_6	LGVERTRSELLPFLLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAIHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLIPMFSNSDEQDSVRLLAVEACVNIAQLLPKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMASHKVKEFCENLSADCRENVIMSQILPCIKELVVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLVNEVIGIRQLSQSLLPAIVELARLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQ
7	PPA-I	3g61A4	0.120	0.765	1.051	threading_7	KLTLVILAISPVLGLS--AGIWAKILSSFTDKELHAYAKAGAVAEEVLAA--------------IRTVIAFGGQKKELERYNNNLEEAK--RLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSLD---------EDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVF---TNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYFENVLLVFSAIVFGAMAVGQVSDYAKATVSASHIIRIIEKTPEIDSY----------------------------------------------------------------------
8	HHPRED-g	2gfp_A	0.152	0.805	1.067	threading_8	---LLLMLVLLVAVG---QMAQTIYIPAI--ADMARDLNVREGAVQSVMGA--YLLTYGVSQLFYGPISDRVG-RRPVILVGMSIFMLATLVAVTTVLIAASAMQGM---GTGVGGVMARTLPRDLYERT-QLRHANSLLNMGILVSPLLAPLIGGLLDTM---WNWRACYLF-------LLVLCAGVTFSMARWMPRPVAPRTSYKTLFG---NSGFNCYLLM--------------LIGGLAGIAAFEACSGVL----MG---AVLGLSSMTVSILFILPIPAAF-------------FGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPDTLLVPAALFPLATSMEPFPFLAGTAGGLQNIGSGVLASLSAML-----------PQTGQGSLGLLMTLMGLLIVLCWLPL----------
9	PROSPECT2	1ejlI	0.112	0.906	1.892	threading_9	GTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPI-------------------------DNIIRAGLIPKFVSFL-----GKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLV--IKHGAIDPLLALDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATE-LPIVTPALR---AIGNIVTGTDEQTQKVIDAGALAVFPSL---LTNPKTNIQKEATWTMSNITAGRQDQIQQVVLVPFLVGVLSKADFKTQKEAAWAITNYTSGG-TVEQIVYLVPLMNLLSAKDTKIIQVILDAISNIFQAAETEKLSIMILNLIEKYFS
10	PPA-I	3zuxA	0.094	0.701	1.042	threading_10	--------NILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAG-------PYIPWLLGIIMFGMGLTLKPSDFDILFKH------------PKVVIIGVIAQFAIMPATAWCLSKLLN-----------LPAEIAVGVILVGC-----CPGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAG--------EMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWPYDAQKALTIEVGMQNSGLAAALAAAHFAVPGAL--FSVWHNISGSLLATYWAAKA--------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.484 to 2q6hA SCOP code=f.54.1.1	TM-score=0.696 to 3ea5B SCOP code=a.118.1.1	TM-score=0.720 to 1wa5B SCOP code=a.118.1.1	TM-score=0.395 to 2j0oA SCOP code=a.250.1.1	TM-score=0.575 to 1pw4A SCOP code=f.38.1.1