Template-based Modeling Results for YIAD_ECOLI

Submitted Primary Sequence

>Length 219
MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL
CCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCCCEECCCCCEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCHHHHHHCCEEEEEEECC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL
441211100000000000110222322234311300100000000000001012233331300100000000101000111211113024304232120222232010002320102122120232003001000200341341100010001221123102300220020012001322032200201010221200212123113311201011034
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL
1	MUSTER	2k1sA	1.000	0.644	2.770	threading_1	------------------------------------------------------------------------------YYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL
2	PROSPECT2	2l26A	0.274	0.982	2.768	threading_2	SAEAAKAALMTALNGLLAPGVDPVVRSLDFSSAEPVFTASVPIVERDTVTLTGTAPSSEHKDAVKRAATSTWPDMKIVNNIEVTGQAPPGPPASGPCA--DLQSAINAVTGGPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARGVAGDHIATVGLGSVNPIASNATPEGRAKNRRVEIVVN--
3	SP3	2l26a	0.284	0.982	3.560	threading_3	DEAAKAALMTALNGLLAPGVVDPVVRSLDFSSAEPVFTASVFGLKRDTVTLTGTAPSSEHKDAVKRAATSTWPDMKIVNNIEVTGQAPPGPPASGPCA--DLQSAINAVTGGPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARGVAGDHIATVGLGSVNPIASNATPEGRAKNRRVEIVVN--
4	SPARKS	2k1sa	1.000	0.644	4.073	threading_4	------------------------------------------------------------------------------YYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL
5	PROSPECT2	2k1sA	1.000	0.644	3.363	threading_5	------------------------------------------------------------------------------YYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL
6	PPA-I	2k1sA	1.000	0.644	3.340	threading_6	------------------------------------------------------------------------------YYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL
7	HHPRED-l	3ldt_A	0.319	0.630	3.904	threading_7	-------------------------------------------------------------------------GLVASIYRDSKRKIIRDLQ-KQDIQYVEYGDTRTLIIPTDKYF--SSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSR--KRKLSQAQAET--TFLWANGIAAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEIQWFT-
8	HHPRED-g	3ldt_A	0.317	0.635	4.103	threading_8	-------------------------------------------------------------------------GLVASIYRDSKRKIIRDLQ-KQDIQYVEYGDTRTLIIPTDKYF--SSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSR--KRKLSQAQAET--TFLWANGIAAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEIQWFTS
9	SP3	2k1sa	1.000	0.644	3.808	threading_9	------------------------------------------------------------------------------YYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL
10	SAM-T99	2k1sA	1.000	0.644	5.444	threading_10	------------------------------------------------------------------------------YYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.496 to 2aizP SCOP code=d.79.7.1	TM-score=0.621 to 1r1mA SCOP code=d.79.7.1	TM-score=0.484 to 2aizP SCOP code=d.79.7.1	TM-score=0.621 to 1r1mA SCOP code=d.79.7.1	TM-score=0.483 to 2aizP SCOP code=d.79.7.1