Template-based Modeling Results for YHJY_ECOLI

Submitted Primary Sequence

>Length 232
MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGLSTERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQISYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTNNSDYLYTMGVSARF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGLSTERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQISYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTNNSDYLYTMGVSARF
CCEEECCCCEEEEEEEEEEEEEEECCCHHHHHHHHEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCCCEEECCEEEEEEEEEECCCCCCCCCCEEEEECCCHHHHHEEEEEEEECCCCCCCCCEEEEEEHHCCCCCCEECCCCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGLSTERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQISYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTNNSDYLYTMGVSARF
4312212122100000000000000110100121000113322211201022322120310012102222222010012133212001000111130202320100100001000020222222231000022211201000000100031130201010000130133112021112212123332100100000001002001000100322322322101000001042
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGLSTERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQVTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSTLGWRVDSRLGDLRPWAQISYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTNNSDYLYTMGVSARF
1	MUSTER	2qomB	0.113	0.996	1.745	threading_1	GTGSASGGFSDNYTHVQVGVDKKHELGLDLFTGFTVTHTDSSASADVFSGKTKDSGAYIDLIGKYVHHDNEYT-ATFATRDYSTHSWYAGAEAGYRYHVTEDAWIEPQAELVYGSVSGKQFAWKDGMHLSMKDKDYNPLIGRTGVDVGKGKWKVTARAGLGYQFDLLANGTVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
2	SPARKS	3slja	0.111	0.974	3.185	threading_2	VDKKHELDGLDLFTGFTVTHTDSSASA------DVFSGKTKSVGAGLYASAMFDSGAYIDLIGKYVHHDNTATFAGLGTRDYSTHSWYAGAEAGYRYHVTEDAWIEPQAELVYGSVSGKQFAKDQGMHLSMKDKDYNPLIGRTGVDVGKKDWKVTARAGLGYQFDLLANGTVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
3	PROSPECT2	3kvnX2	0.116	0.970	1.363	threading_3	------SAPWELTLLPEMAHGTLRAYQDELRSQWQADWENWQNVGQWRGFSQDSAASGDGNGYDLKRKFALGGGERSEKGDTNGHLWAFSARLGYDIAQQAPWHLSPFVSADYARVEVDGYSEKGASATDYDDQKRSSKRLGAGLQGKYAFGSTQLFAEYAHEREYEDDTQDLTMSLNSLPGNTPQDHLNRVSLGFSQKLAPELSLRGGYNWRKG-EDDTQQSVSLALSLDF
4	PPA-I	2qomB	0.117	0.996	3.489	threading_4	GTGSASGGFSDNYTHVQVGVDKKHELGLDLFTGFTVTHTDSSASADVFSGKTKDSGAYIDLIGKYVHHDNEY-TATFATRDYSTHSWYAGAEAGYRYHVTEDAWIEPQAELVYGSVSGKQFAWKDGMHLSMKDKDYNPLIGRTGVDVGKGKWKVTARAGLGYQFDLLANGETVLRDASEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
5	HHPRED-l	3slt_A	0.117	0.957	5.122	threading_5	GVDKKHELDLF-TGFTTHTDSSASADVFS------GKTKSVGAGL-YASAMFD-SGAYIDLIGKYVHHDNEYTAAGLGTRDYSTHSWYAGAEAGYRYHVTEDAWIEPQAELVYGSVSGKQFAWDQGMHLSMKDKDYNPLIGRTGVDVGKSFKDWKVTARAGLGYQFDANGTVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYS-
6	HHPRED-g	3slt_A	0.131	0.953	5.487	threading_6	KKHELDGLDLFTGFTVTHTDSSASAD--------VFSGKTKSVGAGLYASAMFDSGAYIDLIGKYVHHDNEYTATFLGTRDYSTHSWYAGAEAGYRYHVTEDAWIEPQAELVYGSVSGKQFAWK-DQGMHLKDKDYNPLIGRTGVDVGKSFKDWKVTARAGLGYQFDANGTVLRDGEKRIK--GEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
7	SP3	3slja	0.108	1.000	3.271	threading_7	AWARIMSGTGSASGGFSDNYTHVQVGVDKKHELDLFTGFTVTHTDSSASADVFDSGAYIDLIGKYVHHDNTATFAGLGTRDYSTHSWYAGAEAGYRYHVTEDAWIEPQAELVYGSVSGKQFAWKDQGHLSMKDKDYNPLIGRTGVDVGKSFSGVTARAGLGYQFDLLANGTVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF
8	SAM-T99	3kvnX2	0.110	0.983	3.681	threading_8	GGSYRIDEAWRAGVAAGYRQKLEAGAKDSDYRMNSYMASAFVQYQENRWWA-DAALTGGYLDYDLKRKFALGGGERSEKGDTNGHLWAFSARLGYDIAQQAPWHLSPFVSADYARVEVDGYSEKGASALDYDDQKRSSK--RLGAGLQGKYSDTQLFAEYAHEREYEDDTQDLTMSLNSLPGYTPQDHLNRVSLGFSQKLAPELSLRGGYNWRKGEDD-TQQSVSLALSLDF
9	MUSTER	3qq2A	0.186	0.879	1.549	threading_9	RGWSASGGRWYAGGLLGYTYADRTYP------GDGGGK-VKGLHVGGYAAYVGDGGYYLDTVLRLGRYDQQYNIAGTDGGDYRTSGAAWSLEGGRRFELPNDWFAEPQAEVMLWRTSGKRYRA--SNGLRVKVDANTATLGRLGLRFGRRINIVQPYARLGWTQEFKS-------------------GRVELGAGVDAALGKGHNLYASYEYAAGDRINIPWSFHAGYRYSF
10	SPARKS	2qoma	0.110	0.940	2.960	threading_10	QVVDKKHELLDLFTGFTVTHTDSSASADVF------SGKTKSVGAGLYASAMFDSGAYIDLIGKYVHHDNEYTA-GLGTRDYSTHSWYAGAEAGYRYHVTEDAWIEPQAELVYGSVS-------GKQFLSMKDKDYNPLIGRTGVDVGKKDWKVTARAGLGYQFDLANGETVLRDASGEKRIKGEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSF

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.664 to 1uynX SCOP code=f.4.5.1	TM-score=0.751 to 1uynX SCOP code=f.4.5.1	TM-score=0.690 to 1uynX SCOP code=f.4.5.1	TM-score=0.599 to 1uynX SCOP code=f.4.5.1	TM-score=0.666 to 1uynX SCOP code=f.4.5.1