Template-based Modeling Results for YHJU_ECOLI

Submitted Primary Sequence

>Length 559
MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFAAFLLMPLPRYSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFSTDYLIDLVTRFINWQMIGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFSLWPAGQPTTTVTTTGGNAAATVAATGGAPVVGDMPAQTAPPTTANLNAWLNNFYNAEAKRKSTFPSSLPADAQPFELLVINICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATSYSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLKEVRENGGMQSELMDQTNLPVILLGFDGSPVYDDTAVLNRWLDVTEKDKNSRSATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIEQPSSFLAISDLVVRVLDGKIFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFAAFLLMPLPRYSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFSTDYLIDLVTRFINWQMIGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFSLWPAGQPTTTVTTTGGNAAATVAATGGAPVVGDMPAQTAPPTTANLNAWLNNFYNAEAKRKSTFPSSLPADAQPFELLVINICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATSYSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLKEVRENGGMQSELMDQTNLPVILLGFDGSPVYDDTAVLNRWLDVTEKDKNSRSATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIEQPSSFLAISDLVVRVLDGKIFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ
CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHCCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCCHHHCCCCCCCCCCCEEECEEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEEECCCCEEEEEECCEEEEECCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFAAFLLMPLPRYSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFSTDYLIDLVTRFINWQMIGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFSLWPAGQPTTTVTTTGGNAAATVAATGGAPVVGDMPAQTAPPTTANLNAWLNNFYNAEAKRKSTFPSSLPADAQPFELLVINICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATSYSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLKEVRENGGMQSELMDQTNLPVILLGFDGSPVYDDTAVLNRWLDVTEKDKNSRSATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIEQPSSFLAISDLVVRVLDGKIFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ
5532333322212111102000000000001000000010201000000000000020132002100100000000000002010000300021013012111300010021001010000000000000001100100000000000020121212212222222321112222221112011112222213122321222222021002211321232312112212231330100000000000000200112202002200010211210101101000100101012222221122122101001101401022201001202010002103321213032133330121110021120110110022002213433332000000000001011011214212131102300210110022025222300000002100112212120111230111200101000100123023322101023111100002000200323222333220320032023111002222000011241000203212123235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFAAFLLMPLPRYSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFSTDYLIDLVTRFINWQMIGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFSLWPAGQPTTTVTTTGGNAAATVAATGGAPVVGDMPAQTAPPTTANLNAWLNNFYNAEAKRKSTFPSSLPADAQPFELLVINICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATSYSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLKEVRENGGMQSELMDQTNLPVILLGFDGSPVYDDTAVLNRWLDVTEKDKNSRSATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIEQPSSFLAISDLVVRVLDGKIFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ
1	SPARKS	3lxqa	0.142	0.630	1.831	threading_1	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------SAEQFYGKDNQKLDLVRASSTKIDFDPTLLPTNSNPA------------------------TYQGKRKNLVILLQESLGAQFVGSLGGLPLPNLDELGWQFTQYATGTR-SVRGIEAVTTGFPPSPSRAVVKLSKSQTGFIADLLKEQGYHTQFIYGGEANFDN--KTFFFGNGFDQ-IVEEKNYTNP--GFVGSWGVSDEDLYNKADEEFERKGDKPFFSLVFTSSNHSPYEYPQYDSEHTRNNAVKYSDYALGTFFDKAKKSSDDTIFIVIADHDARVFGNLVPVKHFH---IPALIIGK------DIQPRKDDRIANNIDPPTLLSLIGVDAKTPIGRDLTKPLAREDERAQY-DKNFGYLTRDNLVVLSPGEKVSTEYDESQTKPLEV
2	PROSPECT2	1w36B1	0.099	0.907	1.766	threading_2	MSDVAET----LDPLRLPLQGERLFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIH-ELRIACLRETTDNPLYERLLEEIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESLLRYQACADFWRRHCYPLPREIAQVVFET----WKGPQALLRDINRYLQGEAPVIKAPPPDIRDLVITRALAEIRETVAREKRRRG------------------ELGFDDMLDSALRSESGEVLAAAIRTRFPDEFQDTDPQQYRIFRRIWHHQPEQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIP-----FIPVKSAGKNQALRFVF--------KGETQPAMKMWLMEGE---SCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLISVLVRSRQDALTLLEIPSVYLSNRDRLESDKHLVQIVTIHKSKDRHSFEAVLDLNAAPESVDLAEAERLKKGDQKGEPQDAAGLRTCIEALC----DDDIAWQTAQTG-----DNQPWQVNDV
3	PPA-I	3lxqA	0.137	0.615	1.464	threading_3	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAEQFYGKDNQKLDLVRASSTKIDFDP-------------TLLPTNSNPATYQGKRKNLVILLQESLGAQFVGSLGGLPLPNLDELGWQFTQYATGTR-SVRGIEAVTTGFPPSPSRAVVKLSKSQTGFIADLLKEQGYHTQFIYGGEANFDN-KTFFFGNGFDQIVEEKNYTNP----GFVGSWGVSDEDLYNKADEEFERKGDKPFFSLVFTSSNHSPGKIEQYDSEHTRNNAVKYSDYALGTFFDKAKKSSDDTIFIVIADHDARVFGANLVPVKHFHIP----------ALIIGKDI----QPRKDDRIANNIDPPTLLSLIVDAKTPIGRDL----TKPLAREDERAQYDKNFGYLTRDNLVVLSPGEKVSTEYDF
4	PROSPECT2	1w63A	0.080	0.912	1.519	threading_4	MPAPIRRTARTQAEERE-----MIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLEFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSQGLALCTLGCMGSSEMCRDLAGEVEKLLKSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLL-------NEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRIL-------RLLRILGRNDDDSSEAMAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDLAAEKYAPSKRWHIDTIMLTTAGSYVRDDAVPNLIQLITNHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSLSTRFTCTVNRIKKVVSIYGSSIDFKKYDHMRSALLERMP------------------------------VMEK
5	HHPRED-l	3lxq_A	0.138	0.597	2.814	threading_5	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAEQFYGK----DNQK-LDLV-RASSTKITLLPTPATYQGKRKNLVILLQESLGAQFVGSLGGLPLPNLDELGWQFTQ-YATGTRSVRGIEAVTTGFPPSPSRAVVKLSQTGFFTIADLLKEQGYHTQFIYGGEANFDN-KTFFFGNG-FDQ-IVEEKNYTNP--GFVGSWGVSDEDLYNKADEEFESKGDKPFFSLVFTSSNHSPYEYPEGSEH-TRNNAVKYSDYALGTFFDKAKKSSDDTIFIVIADHDARVFGANL-------V-PVKHFHIPALII--GKDI----QPRKDDRIANNID-PPTLLSLIGVDAKP-IGRDLTKPLAREDERA---QYDKNGYLTRDNLVVLSPGEKVSTEYD-
6	PROSPECT2	1qgra	0.098	1.000	1.496	threading_6	MELTSKDPDIKAQYQQRWLAIDANARREVKNYVLHTLGTETYRPSSASQCVAGIACNQWPELIPQLVANVTKESTLEAIGYICQDIDPEQLQDKSNEILTAALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEIKEHIKNPDWRYRDAAVMAFGCILEGPEPQAMPTLIELMKDPSVPEAAINDVYLAPLLQCLIELSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLETTDRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLQMESHIQSTSDRIQFNDLQSLLCATLQNVLQDALQISDVVMASLLRMFSGGVQEDALMAVSLENLGNENVHRLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHVEFILSFIDHIAGDEDHTDGVVACFGKDVLKLVEARPMIHNQA
7	HHPRED-g	3lxq_A	0.138	0.597	2.934	threading_7	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAEQFYGK----DNQK-LDLV-RASSTKITLLPTPATYQGKRKNLVILLQESLGAQFVGSLGGLPLPNLDELGWQFTQ-YATGTRSVRGIEAVTTGFPPSPSRAVVKLSQTGFFTIADLLKEQGYHTQFIYGGEANFDN-KTFFFGNG-FDQ-IVEEKNYTNP--GFVGSWGVSDEDLYNKADEEFESKGDKPFFSLVFTSSNHSPYEYPEGSEH-TRNNAVKYSDYALGTFFDKAKKSSDDTIFIVIADHDARVFGAN-------LV-PVKHFHIPALII--GKDI----QPRKDDRIANNID-PPTLLSLIGVDAKP-IGRDLTKPLAREDERA---QYDKNGYLTRDNLVVLSPGEKVT-EYDF
8	PROSPECT2	1jdha	0.088	0.771	1.442	threading_8	AVVNLIRANDEDQVHQLSKKEASRHAIMMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSVLFYAITTLHNLLLHQEGAKMAVRLAVKFLAITTDCLQILAYGNQESKLIILGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMLGSDDINVVTCAAGILSN-----------------------LTCNNYKNKMMV--CQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEM----------AQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCP----ANHAPLREQGAIPRLVQLLVRAHQDTQFVEG------------------VRMEEIVEGCTGALHILARDVHNRIVIRGLN------TIPLFVQLLYSPIENI---------------------------------------QRVAAGVLCELAQDK-------EAAEAIEAEGATAPLTELLH-------------------SRNEG
9	SPARKS	2w5qa	0.149	0.612	1.485	threading_9	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEDDLTKVLNYT----KQRQTEPNPEYYGVAKKKNIIKIHLESFQTFLINKKGKEVTPFLNKLSTYFPNFFHQTGQGKTSDSEFTMDN-SQGSAFSLKGDNTYQSLPAILDQKQGYKSDVMHGDYKTFWN-RDQVYKHFGID-KFYDATYYDMSDKNVVNLGL-KDKIFFKDSANYQAKM-KSPFYSHLITLTNHYPFTLDGDATVDGYIQTARYLDEALEEYINDLKKKGDNSVIMIYGDHYGISENHNNAMEKLLGEKITDLNRTGFWIKIPGKSGG------INNEYAGQVDVMPTILHLAGIDT-KNYLMFGTDLFSKGHNQVVPFRNGDFIYKYVNGKIYSNKNNELITTQPA
10	PPA-I	2w5qA	0.131	0.614	1.453	threading_10	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEDDLTKVLNYTKQRQTEPNPEYYGVAKKKNIIKIHLESFQTFLINKKGKEVTPFLNKLSTYFPNFFHQTGQGKTSDSEFTMDNLPQGSAFSLKGDNTYQSLPAILDQKQGYKSDVMHGDYKTFWNRDQVYKHFGIDKFYDATYYDMSDKNVVNLG---LKDKIFFKDSANYQAKM-KSPFYSHLITLTNHYPFTLDEKDATIEYIQTARYLDEALEEYINDLKKKGDNSVIMIYGDHYGISENHNNAMEKLLGEKITPANRTGFWIKIPGKS------GGINNEYAGQVDVMPTILHLAGIDTKNYLMFG-TDLFSKGHNQVVPFRNGDFITYKYVNGKIYSNKNNELITTQP

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.533 to 1o98A SCOP code=c.105.1.1	TM-score=0.573 to 1w36E SCOP code=c.37.1.19	TM-score=0.529 to 1ei6A SCOP code=c.76.1.4	TM-score=0.851 to 1w63C SCOP code=i.23.1.1	TM-score=0.534 to 1o98A SCOP code=c.105.1.1