Template-based Modeling Results for YHJQ_ECOLI

Submitted Primary Sequence

>Length 250
MAVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHWQTRLSDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHILINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAMAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSGLKTPVGSAS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHWQTRLSDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHILINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAMAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSGLKTPVGSAS
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHWQTRLSDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHILINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAMAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSGLKTPVGSAS
2110000134111001000000000032132100000001220021002022233311020012123122001312230000000211231121122122202200200220332241000001003100200000001010000002021201120132032310000000023123112100210231253101000121210110122520001012302002100100210021122242222335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLLRLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHWQTRLSDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQALPDGAHILINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAMAECLAAKQPVGEYRSDALAAEEILTLANWCLLNYSGLKTPVGSAS
1	MUSTER	2bejA	0.173	0.924	2.869	threading_1	VRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQGNATSGLGVRAE--RGVYHLLQGE-PLEGLVHPV-DGFHLLPATPDLVGATVELA---GAPTALREAL----RDEGYDLVLLDAPPSLSPLTLNALAAAEGVVVPVQAEYYALEGVAGNPRLRLLGILVTMYDGRTLLAQQVEAQLRAHFGKVFWTVIPRNVRLAEAPSFGKTIAQHAPTSPGAHAYRRLAEEVMARVQEA--------
2	SPARKS	3pg5a	0.168	0.904	4.282	threading_2	-RTISFFNNKGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQCNATQLLTEEQTESKTVYAIFVPSQIAAEITPRSEFGVDVLPGHPALSQIEDSWQSALGRQTGPFRRIHWAGQLDRYDVIFFDVGPSLGPFNRTVLLGCDAFVTPTATDLFSFHAFGNLARFDGEGLRYLGYTTLERFRGRFAAEAERISNSLSK--HSNSTLLGHVPAYAEKI-----NSVAANVYKALPNE----------------
3	PROSPECT2	1hyqA	0.187	0.900	3.200	threading_3	VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMNLELILGME-GLPVTLQNVLAGEARIDEAIYVGPGGVKVVPAGVSLEGLRKA---NPEKLEDVLTQIME-----STDILLLDAPAGLERSAVIAIAAAQELLLVVNPEISSITDGLKRLGTKVLGVVVNRITTLGI--EMAKNEIEAILEAKVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVELANYI--------------A
4	PPA-I	2bejA	0.173	0.924	3.785	threading_4	VRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQGNATSGLGVRAE--RGVYHLLQGEPL--EGLVHPVDGFHLLPATPDLVGATVELAG---APTALREAL----RDEGYDLVLLDAPPSLSPLTLNALAAAEGVVVPVQAEYYALEGVAGLLRLRLLGILVTMYDGRTLLAQQVEAQLRAHFGKVFWTVIPRNVRLAEAPSFGKTIAQHAPTSPGAHAYRRLAEEVMARVQEA--------
5	HHPRED-l	1hyq_A	0.187	0.900	2.782	threading_5	VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITANLELILGME-GLPVTLQNVLAGEARIDEAIYVGPGGVKVVPAGVSLEGLRKA---NPEKLEDVLT-----QIMESTDILLLDAPAGLERSAVIAIAAAQELLLVVNPEISSITDGLERLGTKVLGVVVNRITTLG--IEMAKNEIEAILEAKVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVELANYIA--------------
6	HHPRED-g	2afh_E	0.124	0.964	2.972	threading_6	MRQCAI-YGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKADSTRLILHSKA-QNTIMEMAAEDLELEDVLKAGYGGVKCVESGGPEPGVGCAGR-GVITAINFLEEEGAYED--DLDFVFYDVLGDVVCGMPIRENKAQEIYIVCSGEMMAMYAANNSGSVRLGGLICNSRNT--DREDELIIALANKLGQMI-HFVPRDNVVQRAEIRRMTVIEYDPKAKQADEYRALARKVVDNKLLV-IPNPITM
7	SP3	3pg5a	0.168	0.904	4.488	threading_7	-RTISFFNNKGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQCNATQLLTEEQTESKTVYAIFVPSQIAAEITPRSEFGVDVLPGHPALSQIEDSWQSALGRQTGPFRRIHWAGQLDRYDVIFFDVGPSLGPFNRTVLLGCDAFVTPTATDLFSFHAFGNLAGFDGEGLRYLGYTTLERFRGRFAAEAERISNSLSK--HSNSTLLGHVPAYAEKI-----NSVAANVYKALPNE----------------
8	SAM-T99	2bejA	0.180	0.912	4.158	threading_8	-RRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQGNATSGLGVRAE--RGVYHLLQGE--PLEGLVHPVDGFHLLPATPLVGATVELAGA---------PTALREALREGYDLVLLDAPPSLSPLTLNALAAAEGVVVPVQAEYYALEGVAGLLALRLLGILVTMYDGRTLLAQQVEAQLRAHFGEKFWTVIPRNVRLAEAPSFGKTIAQHAPTSPGAHAYRRLAEEVMARVQEA--------
9	MUSTER	1ionA	0.214	0.916	2.628	threading_9	TRIISIVSGKGGTGKTTVTANLSVALGE-GRKVLAVDGDLTANLSLVLGVDDVNI-TLHDVLAGDAKLEDAIYTQFENVYILPGAVDWEHVIKA------DPRKLPEVIKSLK--GKYDFILIDCPAGLQ-LRASALSGEEAILVTNP-EISCLTDVLKKAGLAILGFILNRYGRSRDIPPEAAQDVD----VPLLAVIPEDPVIREGTLEGIPAVKYKPESKGAQAFIKLAEEVDKLA-GIKAKI----
10	SPARKS	1wcv1	0.175	0.916	4.195	threading_10	VRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQGNATSGLGVRAE--RGVYHLLQGEP--LEGLVHPVDGFHLLPATPDLVGATVELA---GAPTALREAL----RDEGYDLVLLDAPPSLSPLTLNALAAAEGVVVPVQAEYYALEGVAGLLRLRLLGILVTMYDGRTLLAQQVEAQLRAHFGKVFWTVIPRNVRLAEAPSFGKTIAQHAPTSPGAHAYRRLAEEVMARVQ----------

Predicted Tertiary Structure


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TM-score=0.828 to 1ionA SCOP code=c.37.1.10	TM-score=0.823 to 1ionA SCOP code=c.37.1.10	TM-score=0.694 to 1hyqA SCOP code=c.37.1.10	TM-score=0.928 to 1hyqA SCOP code=c.37.1.10	TM-score=0.824 to 1ionA SCOP code=c.37.1.10