Template-based Modeling Results for YHJK_ECOLI

Submitted Primary Sequence

>Length 662
MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHCCCCHHHHHHHHHHHHCCCHHHEEEEEEHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEECHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK
55213211121001000000000000000100210221222022202200310321011001301230021002302312100001000221120033212232202200121031211000001313222332000100010121300310020001000010010000000001000110020023002103312233211100000102333320100100000220132113101110110101300000001200220024222000000001103200010201011100110020034101331000102111000002203212101200220021022101024010100000000002212202200010100000023422210000231002102311201220120044220000010101032120000100010211211210031001102200100200200012002201202451120100000001102332002101300332403220000100101222113100200210450001000001010100120020032022110101200032021112000000100320301000211213211210141201101000013102132022112335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK
1	MUSTER	3pjwA	0.226	0.622	2.943	threading_1	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AALFQEQAERSEKLRTESYQDNLTGLANRRYFEMQLNARVSNPEQGYLLLLRVKDLAGLNQRLGGQRTDELLKAVGEQLSRECETQNLVTRIRGGEFAVLAPGM-TREEALQLAQSLDSALSSLYATGATDVAAVASIGLAPFAHGDSPQAVLSLGDQALAQAEGQGEQNWACLDGDD------HHAWHRLLDQALNQRRFELFFQPVVAAQDTLVLHYKVLSRLLDEQGQTIPAGRFLPWLERFGWTARLDRLMLERVLEQMAGH-----EESLALNLSSATLADPQALNKVFEILRAHSNLGARLTLEIGEEQLP-EQAVLEQLTRRLRELGFSLSLQRFGGRFS---MIGNLARLGLAYLKIDGSYIRAIDQERLFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEPKPWG----------
2	SPARKS	3n3ta	0.364	0.373	5.179	threading_2	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERLTLDTRLRQALERNELVLHYQPIVELASGRIVGGEALVRWEDPERGLV-PSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQQQGRDLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVLVT--DEVRTCLDALRARGVRLALDDFGTGYS---SLSYLSQLPFHGLKIDQSFVRKIPAHTQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGNL-STPQAADAFASLLDRQK
3	PROSPECT2	3pjwA	0.224	0.619	4.402	threading_3	AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFQEQRSEKLRTESYQDNLTGLANRRYFEMQLNARVSNPEQGYLLLLRVKDLAGLNQRLGGQRTDELLKAVGEQLSRECAKQNLVTRIRGGEFAVLAPGM-TREEALQLAQSLDSALSSLYATGATDVAAVASIGLAPFAHGDSPQAVLSLGDQALAQAEGQGEQNWACLDGDD------HHAWHRLLDQALNQRRFELFFQPVVAAQDTQVLHYKVLSRLLDEQGQTIPAGRFLPWLERFGWTARLDRLMLERVLEQMAGH-----EESLALNLSSATLADPQALNKVFEILRAHSNLGARLTLEIGEEQLPEQ-AVLEQLTRRLRELGFSLSLQRFGGRFS---MIGNLARLGLAYLKIDGSYIRAIDQERLFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEPKPW----------G
4	PPA-I	3pjwA	0.226	0.622	7.045	threading_4	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AALFQEQAERSEKLRTESYQDNLTGLANRRYFEMQLNARVSNPEQGYLLLLRVKDLAGLNQRLGGQRTDELLKAVGEQLSRECETQNLVTRIRGGEFAVLAPGM-TREEALQLAQSLDSALSSLYATGATDVAAVASIGLAPFAHGDSPQAVLSLGDQALAQAEGQGEQNWACLDGDD------HHAWHRLLDQALNQRRFELFFQPVVAAQDTQVLHYKVLSRLLDEQGQTIPAGRFLPWLERFGWTARLDRLMLERVLEQMAGH-----EESLALNLSSATLADPQALNKVFEILRAHSNLGARLTLEIGEEQLP-EQAVLEQLTRRLRELGFSLSLQRFGGRFSMI---GNLARLGLAYLKIDGSYIRAIDQERLFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEPKPWG----------
5	HHPRED-l	3hvb_A	0.241	0.376	6.027	threading_5	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAQRGDVIAILQQALETNSFRLLFQPVISLRGDSHENYEVLLRLLNPQGQEVPPAEFLHAAKEAGLAEKIDRWVILNSIKLLAEHRAKGHQTKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFGCSLNPFNAL---KHLTVQFIKIDGSFVQDLNQVQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQAMDYD--FS---
6	HHPRED-g	3hvb_A	0.241	0.376	5.047	threading_6	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAQRGDVIAILQQALETNSFRLLFQPVISLRGDSHENYEVLLRLLNPQGQEVPPAEFLHAAKEAGLAEKIDRWVILNSIKLLAEHRAKGHQTKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFGCSLN---PFNALKHLTVQFIKIDGSFVQDLNQVQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQAMDYDFS-----
7	SP3	3gfxa	0.186	0.560	5.392	threading_7	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLTTLIYRSQV-------------------------HPDRPPV----DLDALVHRASSKNLPLGITGILLFNGLQFFQVL------EGTEEALESLFSEIQSPRHRDVVELMRDRILDLRLFETDGALEEILRFSDRMFRLLSAFIADGGRYCLPEPLQPSRWMMMPATAAPQHLPGQPCQFALQAIVEPAKKRVSSFEALIRSPT---GGSPVEMFAAIAAEDRYRFDLESKAYAFALAGQLPLG----KHQLAINLLPGSYHHPDAVGWLMDSLLAAGLRPDQVLIEVTETEVITCFDQFRKVLKALRVAGMKLAIDDFGAGYS---GLSLLTRFQPDKIKVDAELVRDIHISQAIVASVVRCCEDLGITVVAEGVETLEEWCWLQSVGIRLFQGFLFSRPCLNGIGEICWPVA-
8	SAM-T99	3ii8B	0.371	0.370	5.812	threading_8	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERLTLDTRLRQALERNELVLHYQPIVELASGRIVGGEALVRWEDPERGLV-PSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQQQGRDLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVLVTD--EVRTCLDALRARGVRLALDDFGTGYSSLSYL---SQLPFHGLKIDQSFVRKIPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGNL-STPQAADAFASLLDR--
9	MUSTER	3gg1B	0.214	0.559	1.989	threading_9	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLTTLIYRSQVHPDLDALVHRAGITGILLFNGLQFFQVESLFSEIQSDPRHRDVVELMRDYSAYR----RFHGTGMRILDLRLFETDGALEEILR---------------------------FSTFGVTEPVNDRMFRLLSAFIADGGRYCLPEPLQ------PSRWMMMAPQHLPGQPCQFALQAIVEPAKKRVSSFEALIRS--PTGG-SPVEMFAAIAAEDRYRFDLESKAYAFALAGQLPLG----KHQLAINLLPGSLYHPDAVGWLMDSLLAAGLRPDQVLIEVTETEVITCFDQFRKVLKALRVAGMKLAIDDFGAGYSGL---SLLTRFQPDKIKVDAELVRDIHISQAIVASVVRCCEDLGITVVAEGVETLEEWCWLQSVGIRLFQGFLFSRPCLNGIGEICWPVAR
10	SPARKS	3gfxa	0.211	0.559	4.995	threading_10	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLTTLIYRSQVHPD--RPPVD--LDALVHRASSKNLPLGGILLFNGLQFFQVLEG--TEEALESLFSEIQ---SDPRHRDVVELMRDRILDLRLFETDGALEEILRFSDRMFRLLSAFIADGGRYCLPEPLQPSRWMMMPATAAPQHLPGQPCQFALQAIVEPAKKRVSSFEALIRSPT---GGSPVEMFAAIAAEDRYRFDLESKAYAFALAGQLPLG----KHQLAINLLPGSLHHPDAVGWLMDSLLAAGLRPDQVLIEVTETEVITCFDQFRKVLKALRVAGMKLAIDDFGAGYSGLS---LLTRFQPDKIKVDAELVRDIHISQAIVASVVRCCEDLGITVVAEGVETLEEWCWLQSVGIRLFQGFLFSRPCLNGIGEICWPVA-

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.539 to 2basA SCOP code=c.1.33.1	TM-score=0.541 to 2basA SCOP code=c.1.33.1	TM-score=0.556 to 2basA SCOP code=c.1.33.1	TM-score=0.493 to 2basA SCOP code=c.1.33.1	TM-score=0.538 to 2basA SCOP code=c.1.33.1