Template-based Modeling Results for YHJJ_ECOLI

Submitted Primary Sequence

>Length 498
MQGTKIRLLAGGLLMMATAGYVQADALQPDPAWQQGTLSNGLQWQVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQQGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHALQSQDMVATWPADTKEGWWRYRLKGSTLLGHDPADPLKQPVEAEKIKDFYQKWYTPDAMTLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAEAVSIMTDAVRQDRLSIMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALSASNSKDIGLGFDCRVLYLRAQCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARADTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILLQPKGEPEFNMKALQAVWDQIMAPSTAAATTSVATDDVHPEVTDIPPAQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQGTKIRLLAGGLLMMATAGYVQADALQPDPAWQQGTLSNGLQWQVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQQGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHALQSQDMVATWPADTKEGWWRYRLKGSTLLGHDPADPLKQPVEAEKIKDFYQKWYTPDAMTLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAEAVSIMTDAVRQDRLSIMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALSASNSKDIGLGFDCRVLYLRAQCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARADTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILLQPKGEPEFNMKALQAVWDQIMAPSTAAATTSVATDDVHPEVTDIPPAQ
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQGTKIRLLAGGLLMMATAGYVQADALQPDPAWQQGTLSNGLQWQVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQQGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHALQSQDMVATWPADTKEGWWRYRLKGSTLLGHDPADPLKQPVEAEKIKDFYQKWYTPDAMTLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAEAVSIMTDAVRQDRLSIMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALSASNSKDIGLGFDCRVLYLRAQCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARADTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILLQPKGEPEFNMKALQAVWDQIMAPSTAAATTSVATDDVHPEVTDIPPAQ
431111010000000000001132321322221110103200200002134223210000000101122222321000000010002202203221022002200232321210000210000001013333300320010002001402023310231121121122222313200011102211121111021133203021012002411103000000003121410021014101303134322232222232422101012322421100000211233152111002101110023001210120023221310000010210112110000010333303100210120023035321333102100221231022012112312131000110100222223112320220122003201230012003310333200000114343423131022002312222222122322233123322413438
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQGTKIRLLAGGLLMMATAGYVQADALQPDPAWQQGTLSNGLQWQVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQQGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHALQSQDMVATWPADTKEGWWRYRLKGSTLLGHDPADPLKQPVEAEKIKDFYQKWYTPDAMTLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAEAVSIMTDAVRQDRLSIMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALSASNSKDIGLGFDCRVLYLRAQCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARADTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILLQPKGEPEFNMKALQAVWDQIMAPSTAAATTSVATDDVHPEVTDIPPAQ
1	MUSTER	3go9A	0.561	0.896	2.646	threading_1	----------------LVGGLLQAEALQPDPAWQQGKLDNGFSWQLLATPQRPSDRIELRLIVNTGSLSENTQEVGFAHLLPRLALSSASFTPA-QLQSLWQQGIDNERPLPPAITSYDFTLYSLSLPNNRPDLLKDALAWLSDTAGNLAVSEQTVNAALNTATDPIATFPNIQEPWWRYRLKGSSLIGHDPGQPVTQPVDVEKLKQFYQQWYTPDA-TLYVVGNVDSRSIAAQISKAFSELKGKRTAPAAVATLAPLPPEPVSL-NEQAAQDTLSLWDT-PWHPIQDS-ALSRYWRSDLAREALFWHIKQVLEKNNQKNLKLGFDCRVQYQRAQCAIHLNTPVENL-TANTFVARELAALRANGLSQAEFDALTQKNDQLSKLFATYARTDTD--ILSQRLRSQQSGVVDIAPEQYQKLRQAFLSGLTLAELNRELKQQLSQDTTLVLQ-PKGEPEVNVKALQEIYNGIA---------------------------
2	SPARKS	3amjc	0.156	0.823	5.378	threading_2	----------------------------PAASTFETTLPNGLKVVVREDHRAP--TLVHMVWYRVGSMDETTGTTGVAHALEHMMFKGTKDVGPGEFSKRVAA----MGGRDNAFTTRDYTAYYQQVPSSR---LSDVMGLEADRMANLVVDDELFKKEIQVIAEERRWRDDKPRSKAYEALMAASYVAVPVIGWMIQNMTAQDVRDWYKRWYGPNNATVVVVGDVEHEAVFRLAEQTYGKLARVEAPARKQQGEPQQAGVRRVTVKAPAELPYLALAWHVPAIVDKSRDAYALEILAAVLDGYDGARMTRQLVRGNKHAVSAGAGYDSLGQQGLFILEGVPSKGTIAQLETDLRAQVRDIAAKGVTEAELSRVKSQMVAGKVYEQD-----SLMGQATQIGGLEVLGLS----WRDDDRFYQQLRSVTAAEVKAAAARLLTDDTLTVANLVPLPP------------------------------------------
3	PROSPECT2	3go9A	0.547	0.896	4.126	threading_3	L----------------VGGLLQAEALQPDPAWQQGKLDNGFSWQLLATPQRPSDRIELRLIVNTGSLSENTQEVGFAHLLPRLALSSASFTPAQL-QSLWQQGIDNERPLPPAITSYDFTLYSLSLPNNRPDLLKDALAWLSDTAGNLAVSEQTVNAALNTTDPIATFPQNIQEPWWRYRLKGSSLIGHDPGQPVTQPVDVEKLKQFYQQWYTPDA-TLYVVGNVDSRSIAAQISKAFSELKGKRTAPAAVATLAPLPPEPV-SLNEQAAQDTLSLWDTPWHPIQDSALSR--YWRSDLAREALFWHIKQVLEKNNQKNLKLGFDCRVQYQRAQCAIHLNT-PVENLTANTFVARELAALRANGLSQAEFDALTQKN--DQLSKLFATYARTDTDILSQRLRSQQSGVVDIAPEQYQKLRQAFLSGLTLAELNRELKQQLSQDTTLV-LQPKGEPEVNVKALQEIYNGI---------------------------A
4	PPA-I	3go9A	0.545	0.896	3.449	threading_4	----------------LVGGLLQAEALQPDPAWQQGKLDNGFSWQLLATPQRPSDRIELRLIVNTGSLSENTQEVGFAHLLPRLALSSASFT-PAQLQSLWQQGIDNERPLPPAITSYDFTLYSLSLPNNRPDLLKDALAWLSDTAGNLAVSEQTVNAALNTATDPIAFPQNIQEPWWRYRLKGSSLIGHDPGQPVTQPVDVEKLKQFYQQWYTPDA-TLYVVGNVDSRSIAAQISKAFSELKGKRTAPAAVATLAPLPPEPVSLNEQAAQDTLSLWDTPWHPIQDS---ALSRYWRSDLAREALFWHIKQVLEKNNQKNLKLGFDCRVQYQRAQCAIHLNTPVENL-TANTFVARELAALRANGLSQAEFDALTQKNDQLSKLFATYARTDT--DILSQRLRSQQSGVVDIAPEQYQKLRQAFLSGLTLAELNRELKQQLSQDTT-LVLQPKGEPEVNVKALQEIYNGIA---------------------------
5	HHPRED-l	3go9_A	0.597	0.888	4.274	threading_5	---------VGGLL--------QAEALQPDPAWQQGKLDNGFSWQLLATPQRPSDRIELRLIVNTGSLSENTQEVGFAHLLPRLAL-SSASFTPAQLQSLWQQGIDNERPLPPAITSYDFTLYSLSLPNNRPDLLKDALAWLSDTAGNLAVSEQTVNAALNTATDPIATFPQNIQEPWRYRLKGSSLIGHDPGQPVTQPVDVEKLKQFYQQWYTPDA-TLYVVGNVDSRSIAAQISKAFSELKGKRTAPAAVATLAPLPPEPVSL-NEQAAQDTLSL-WDTPWHPIQDS-ALSRYWRSDLAREALFWHIKQVLEKQKNLKLGFDCRVQ--YQRAQCAIHLNTPVENLTAN-TFVARELAALRANGLSQAEFDAL-TQKNDQLSKLFATYARTDTDIL-SQRLRSQQSGVVDIAPEQYQKLRQAFLSGLTLAELNRELKQQLSQDTTLVL-QPKGEPEVNVKALQEIYNGI----------------------------
6	HHPRED-g	3go9_A	0.580	0.886	3.407	threading_6	--V-------GGLL--------QAEALQPDPAWQQGKLDNGFSWQLLATPQRPSDRIELRLIVNTGSLSENTQEVGFAHLLPRLAL-SSASFTPAQLQSLWQQGIDNERPLPPAITSYDFTLYSLSLPNNRPDLLKDALAWLSDTAGNLAVSEQTVNAALNTATDPIATFPQNIQEPWRYRLKGSSLIGHDPGQPVTQPVDVEKLKQFYQQWYTPDA-TLYVVGNVDSRSIAAQISKAFSELKGKRTAPAAVATLAPLPPEPVSL-NEQAAQDTLSL-WDTPWHPIQDS-ALSRYWRSDLAREALFWHIKQVLEKQKNLKLGFDCRVQY--QRAQCAIHLNTPVENLTAN-TFVARELAALRANGLSQAEFDAL-TQKNDQLSKLFATYARTDTDIL-SQRLRSQQSGVVDIAPEQYQKLRQAFLSGLTLAELNRELKQQLSQD-TTLVL-QPKGEEVNVKALQEIYNGI----------------------------
7	SP3	3amjc	0.154	0.823	5.359	threading_7	----------------------------PAASTFETTLPNGLKVVVREDHRAP--TLVHMVWYRVGSMDETTGTTGVAHALEHMMFKGTKDVGPGEFSKRVAA----MGGRDNAFTTRDYTAYYQQVPSSR---LSDVMGLEADRMANLVVDDELFKKEIQVIAEERRWRDDKPRSKAYEALMAASYVAVPVIGWMIQNMTAQDVRDWYKRWYGPNNATVVVVGDVEHEAVFRLAEQTYGKLARVEAPARKQQGEPQQAGVRRVTVKAPAELPYLALAWHVPAIVDLDRDAYALEILAAVLDGYDGARMTRQLVRGNKHAVSAGAGYDSRGQQGLFILEGVPSKGTIAQLETDLRAQVRDIAAKGVTEAELSRVKSQMVAGKVYEQD-----SLMGQATQIGGLEVLGLS----WRDDDRFYQQLRSVTAAEVKAAAARLLTDDTLTVANLVPLPP------------------------------------------
8	SAM-T99	3amiA	0.153	0.815	4.571	threading_8	----------------------------PAASTFETTLPNGLKVVVREDHRAP--TLVHMVWYRVGSMDETTGTTGVAHALEHMMFKGTKDVGPGEFSKRVAAMG----GRDNAFTTRDYTAYYQQVPSSR---LSDVMGLEADRMANLVVDDELFKKEIQVIAEERRWRTDPRSKAYEALYVAHPYR-VPVIGNDIQNMTAQDVRDWYKRWYGPNNATVVVVGDVEHEAVFRLAEQTYGKLARVEAPARKQQGEPQQAGVRRVTVKAPAELPYLALAWHVPAIDLDSRDAYALEILAAVLDGYDGARMTRQLVRGNKHAVSAGAGYDSLRGQGLFILEGVPSKGTIAQLETDLRAQVRDIAAKGVTEAELSRVKSQMVAGKVYEQDS-----LMGQATQIGGLEVLGLSW----RDDDRFYQQLRSVTAAEVKAAAARLLTDDTLTVANLVP---------------------------------------------
9	MUSTER	3amiA	0.156	0.823	2.273	threading_9	----------------------------PAASTFETTLPNGLKVVVREDHRAP--TLVHMVWYRVGSMDETTGTTGVAHALEHMMFKGTKDVGPG----EFSKRVAAMGGRDNAFTTRDYTAYYQQVPSS---RLSDVMGLEADRMANLVVDDELFKKEIQVIAEERRWRDDKPRSKAYEALMAASYVAVPVIGWMIQNMTAQDVRDWYKRWYGPNNATVVVVGDVEHEAVFRLAEQTYGKLARVEAPARKQQGEPQQAGVRRVTVKAPAELPYLALAWHVPAIVDKSRDAYALEILAAVLDGYDGARMTRQLVRGNKHSAGAGYDSLSRGQQGLFILEGVPSKGTIAQLETDLRAQVRDIAAKGVTEAELSRVKSQMVAGKVYEQD-----SLMGQATQIGGLEVLGLSW----RDDDRFYQQLRSVTAAEVKAAAARLLTDDTLTVANLVPLPP------------------------------------------
10	SPARKS	3amia	0.154	0.823	5.374	threading_10	----------------------------PAASTFETTLPNGLKVVVREDHRAP--TLVHMVWYRVGSMDETTGTTGVAHALEHMMFKGTKDVGPGEFSKRVAA----MGGRDNAFTTRDYTAYYQQVP---SSRLSDVMGLEADRMANLVVDDELFKKEIQVIAEERRWRDDKPRSKAYEALMAASYVAVPVIGWMIQNMTAQDVRDWYKRWYGPNNATVVVVGDVEHEAVFRLAEQTYGKLARVEAPARKQQGEPQQAGVRRVTVKAPAELPYLALAWHVPAIVDLDRDAYALEILAAVLDGYDGARMTRQLVRGNKHAVSAGAGYDSLGQQGLFILEGVPSKGTIAQLETDLRAQVRDIAAKGVTEAELSRVKSQMVAGKVYEQD-----SLMGQATQIGGLEVLGLS----WRDDDRFYQQLRSVTAAEVKAAAARLLTDDTLTVANLVPLPP------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.688 to 1hr6A SCOP code=d.185.1.1	TM-score=0.684 to 1hr6D SCOP code=d.185.1.1	TM-score=0.773 to 1be3A SCOP code=d.185.1.1	TM-score=0.684 to 1hr6D SCOP code=d.185.1.1	TM-score=0.687 to 1hr6A SCOP code=d.185.1.1