Template-based Modeling Results for YHJH_ECOLI

Submitted Primary Sequence

>Length 255
MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEECCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCHHHHHHHHHHCCCCEEEEEEHHHHHCCHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL
443211221201310120121221123221000110012321200001000002012232320002200000230210200220012002113221332010000010110232311220130044131010100120222232001001300100001100000000002303211010021002203313302200000020035021100021121331021024140200100000210213101200222
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL
1	MUSTER	3ii8B	0.205	0.937	3.359	threading_1	-----HERLTLDTRLRQALERN------ELVLHYQPIVEASGRIVGGEALVRWEDP--ERGLV-PSAFIPAAEDTGLDWVLEACCTQLRAWQQQGRAADLTLSVNISTRQFEGEHLTRAVDRALARSGCLELEITENVLVTDRTCLDALRARVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGNL-STPQAADAFASLLDRQ
2	SPARKS	3n3ta	0.206	0.933	5.555	threading_2	------ERLTLDTRLRQALE------RNELVLHYQPIVEASGRIVGGEALVRWEDP--ERGLV-PSAFIPAAEDTGLDWVLEACCTQLRAWQQQGRADDLTLSVNISTRQFEGEHLTRAVDRALARSGCLELEITENVLVTDRTCLDALRARVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGNL-STPQAADAFASLLDRQ
3	PROSPECT2	3pjwA2	0.163	0.890	3.948	threading_3	GD----DHHAWHRLLDQALN------QRRFELFFQPVVQDTQLVLHYKVLSRLLDEQG--QTIPAGRFLPWLERFGWTLMLERVLEQMAGH-------EESLALNLSSATLADPQALNKVFEILRAHARLTLEIGEEQLPEQAVLEQLTRRLFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDQESDKRLFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEPKP---------WG
4	PPA-I	3ii8B	0.205	0.937	6.758	threading_4	-----HERLTLDTRLRQALERN------ELVLHYQPIVELSGRIVGGEALVRWEDP--ERGLV-PSAFIPAAEDTGLDWVLEACCTQLRAWQQQGRADDLTLSVNISTRQFEGEHLTRAVDRALARPDCLELEITENVLVTDRTCLDALRARVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGNL-STPQAADAFASLLDRQ
5	HHPRED-l	2bas_A	0.154	0.894	4.793	threading_5	---------------LDPLDIL--TNIDDVLPYYQAIFSAEQKVVGYEVLGRILAD--SEIQSLGPFFLDAGIPEEYKLEVDNRIIRQALDRFLEADSDLLIF-NQDANLL-LDESFLELLKKGIELHRFVLEITEHNFEGDYH-LAYYRYGIKIAVDNIGKESSNLDRIALLSPDLLKIDLQALK----SPSYEHVLYSISLLARKIGAALLYEDIEANFQLQYAWRNGGRYFQGYYLVSPSETDVLKQRLKT-
6	HHPRED-g	3hvb_A	0.182	0.925	4.359	threading_6	----AAQRGDVIAILQQALET------NSFRLLFQPVISLGDSHENYEVLLRLLNPQ--GQEVPPAEFLHAAKEAGLAWVILNSIKLLAEHRAKGH--QTKLFVHLSSASLQDPGLLPWLGVALKAARSLVFQISEADATSYLKLTQGLATLHQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDLNQV-ENQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQAMDYDFS----
7	SP3	3n3ta	0.210	0.933	5.528	threading_7	------ERLTLDTRLRQALE------RNELVLHYQPIVEASGRIVGGEALVRWEDP--ERGLV-PSAFIPAAEDTGLDWVLEACCTQLRAWQQQGRAADLTLSVNISTRQFEGEHLTRAVDRALARSGCLELEITENVLVTDRTCLDALRARVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGN-LSTPQAADAFASLLDRQ
8	SAM-T99	3ii8B	0.206	0.933	5.870	threading_8	-----------HERLTLDTRLRQALERNELVLHYQPIVELSGRIVGGEALVRWEDPER---GLVPSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQDDLTLSVNISTRQFEGEHLTRAVDRALARRPCLELEITENVLVTDEVLDALRARGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGNLST-PQAADAFASLLDR-
9	MUSTER	3hv9A	0.178	0.945	3.291	threading_9	ELAAAAQRGDVIAILQQALE------TNSFRLLFQPVISRGDSHENYEVLLRLLNP--QGQEVPPAEFLHAAKEAGLRWVILNSIKLLAEHRAKG--HQTKLFVHLSSASLQDPGLLPWLGVALKAARSLVFQISEADATSYKQAKQLTQGLCQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDLN-QVENQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQAMDYD---FSS
10	SPARKS	3u2ea	0.202	0.933	5.519	threading_10	------SRLALEADLRGAIG------RGEITPYFQPIVRSTGALSGFEALARWIHP--RRG-LPPDEFLPLIEEGLSLGAHHAAAQQLSTWRAAHPAGNLTVSVNLSTGEIDRPGLVADVAETLRVNRALKLEVTESDIRDPERAAVILKTLAGLALDDFGTGFSSLSYLTRLPFDTLKIDRYFVRT-GNNAGSAKIVRSVVKLGQDLDLEVVAEGVEN-AEAHALQSLGCDYGQGFGYAPALSPQEAEVYLNEA

Predicted Tertiary Structure


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TM-score=0.752 to 2basA SCOP code=c.1.33.1	TM-score=0.754 to 2basA SCOP code=c.1.33.1	TM-score=0.738 to 2basA SCOP code=c.1.33.1	TM-score=0.716 to 2basA SCOP code=c.1.33.1	TM-score=0.752 to 2basA SCOP code=c.1.33.1