Template-based Modeling Results for YHIS_ECOLI


  Submitted Primary Sequence

>Length 260
MSIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQPINSTFSGEGYISDQYDLAQHQLQQINACHTNTTYTNADYSKVVAQLVSLITNIETISSTQLTQQTQSILNQINNIRYEKNKSAECRIIVIANPKPDKAIITKISVEEGIPITFSVQTMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLNINFTDANLGKVRISGEILLG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQPINSTFSGEGYISDQYDLAQHQLQQINACHTNTTYTNADYSKVVAQLVSLITNIETISSTQLTQQTQSILNQINNIRYEKNKSAECRIIVIANPKPDKAIITKISVEEGIPITFSVQTMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLNINFTDANLGKVRISGEILLG
CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCEEEECCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQPINSTFSGEGYISDQYDLAQHQLQQINACHTNTTYTNADYSKVVAQLVSLITNIETISSTQLTQQTQSILNQINNIRYEKNKSAECRIIVIANPKPDKAIITKISVEEGIPITFSVQTMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLNINFTDANLGKVRISGEILLG
55231121111112000110123232130141240213123322213121223111231121023103101102122212302112001100200210320222312330220022022021243432201000001243341000101033202110001001232310122313023203102300220031003213332302001001000011212302100000020002000203122131020201010136
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQPINSTFSGEGYISDQYDLAQHQLQQINACHTNTTYTNADYSKVVAQLVSLITNIETISSTQLTQQTQSILNQINNIRYEKNKSAECRIIVIANPKPDKAIITKISVEEGIPITFSVQTMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLNINFTDANLGKVRISGEILLG
1SPARKS1bupa0.2350.9351.127threading_1VGIDL--G--STYHGKVEIIANDQGNRTTPSTDTDAAKNQVAMNPTNTVFDGRRFDDAVVQSDMKHWPQVEYKGETKSFYPEESSMVLTKMKEIAEAYKTVTNAVVTSQRQATKDAGTNINLDKKVGAE-RNVLIFDLGGGTFDVSILTIEDG---IFEVKSTAGDTNHFIAEFKDISENKRAVRRLRTACERAKRTLSSST---QASI---EIDSLYEGID---FYTSITRARFEELNAFRGTDAKLDKSQIHDIVLVG
2PROSPECT21k47a0.0590.9151.223threading_2HIAVKTCGKLYEPGQLALIKDIPIYRAEIAFSDSYRIYS-------------DNPDYSLIQETIALGDFLAVRGQNLRPKKFGLGSSGSVVVLVVKALLALYNLSVDQNLLFKLTSAVLLKRGDNGSGDLLVLYQSFDRDWGFSISQVKPTLECDFLVGWTKEVAVSSHVQQIKQNINQNFLTSSKETVVSLVEALEQGKSEKIIEQVSQDLQAVAKSSGAGGGDCGIALTKTLKNRWADLGIE---------LLYQERI
3HHPRED-g3nb2_A0.1430.8851.210threading_3YPPILNEAIIVLSGAILGDVKELSNGGCYIDLSDIQ-ENIL--SVLDNYTKDDKYNHDKVRAAEELIKKISLDEL------AAFRPYVMSLAD------SFSIHPYLNNAQQWLEPICDDFF---DTI-MSW---FNNSIMMYMENGSLLQAGM--YFERHAMVSYNSSFIQIVMNSRRDG--MQERFRELYEVYLKNEKVYPVTQDWLAYNWVL--LSSQD-DGMAMMCSLSHMVDMLSPN-TSTNWMSFYKDGEVQNT
4PROSPECT21ecea0.0720.9621.118threading_4AGGGYSGREILDANNVINWFGFETCNYVVHGLWSRDYPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQISALWYTSSVSEATWISDLQALAQRYKCWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGIWNKNWGYLFNQN----------IAPVWLGEFGTTLQSTTDQTWLKTLVQYLRPTAQYGADSFQWTFWSWNPDS
5HHPRED-g2f3l_A0.3200.1921.048threading_5------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASYEDVKLIGEDFSGKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIG
6PROSPECT21ci9a0.0640.9621.093threading_6LRERRLVGAVAALDAPVTRWLPEFRPRLADGSEPLGAGSVYDRLGISDGIDLRDFDLDEN------LRRLASAPLSFAPGSGWQYSLALDVLGAV--VERATGQPLAAAVDALVAQMRDCGFVSAEPERFAVPYHDGQPEPRDGIEVPLPEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRA--NPGFLPETLADAARRDQAGVGAETRGPGWGFGYLSAVLDDPAAAGTPQHAGTLQWGGVYGHSWYA
7HHPRED-g2o6w_A0.1380.3081.047threading_7------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TNNLYRLELEREGVNLPRENTDLENAILIGANLQGANLENANLQGANLENANLRGAILTGVNLEETHLKGIETDKNTVWD
8PROSPECT21bhga30.1020.8651.087threading_8VAVTKSQFLINNKHEDADIRGKGFDWPLTSHYPYAEEVMQMCDRYDECPGVGLALPQFFNNVSLHH-----------------HMQVMEEVVRRDKNHPAVEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKG------APYVDVICLNSYYSWYHD----------YGHLELIQLQLATQFENWYKKYQKP--IIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFAD
9PROSPECT21pieA0.0710.9771.085threading_9EHTDYNGGYVFPASITIGTTGLARLREDKKVKLYSENFPKLGVIEFDLDEVEKKDGELWSNYVKGMIVMLKGAGYEIDKTASGLSSSASLELLVGVVLDDLFNLNVPR--LELVQLGQKTENDYIGVNSGKAIELDCNTLK----YEMVPVELRDYDIVIMNTNKPRALRMQTRLDIQSNLTKFGELLNASHASLKDDYEVTGLETAQKQAGVLGARMTGAGFGGCAIALVSAFRKAVGQVYEEVVGYPASFYVAQITKL
10MUSTER3du1X0.1750.8350.807threading_10MNVNFQ-HI-NLQEIELTNASTGADYADLRQTRLGKS-NFSHTCLREADLSEWGIDLSEADLYRAILREADL--TGAKLVKTRLEEANLIKASLCG---NLNSANLSR---CLLFQAD-LRPSSNQRTDLGYVLLTGADLSYADLRAASLHH---------ANLDGAKL---CRANFGRT------------------IQWGNLAADLSGASLQGADLSYANLESAILRKANLQGADLTGAILKDAELKGAIMPDGSIH-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.486 to 1yuwA
SCOP code=b.130.1.1
TM-score=0.679 to 1h74A
SCOP code=d.14.1.5
TM-score=0.478 to 3ea5B
SCOP code=a.118.1.1
TM-score=0.698 to 1eceA
SCOP code=c.1.8.3
TM-score=0.360 to 2bm5A
SCOP code=b.80.8.1