Template-based Modeling Results for YHIR_ECOLI


  Submitted Primary Sequence

>Length 280
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGIAEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGIAEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGIAEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
3212200101000000010000000020133333000000000000001012320221121120001003333022202100200331142231310010010012002331100001012210210122035222020020100100232012223200000101132421021002000200430220000000001133102300310241214200001000123334310100000000011202310230021003201323212010101246
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGIAEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
1MUSTER2oo3A0.3950.9393.270threading_1--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKD----KTEEYKEGINPVWLRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS-KSVRIELHLNPLINE-GMTGCGLWIINPPYTFPSEIKLVLETLTTYFNP-GSSSYMIES--SK
2SPARKS2oo3a0.3920.9397.852threading_2--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKD----KTEEYKEGINPVWLDENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREIS-SKSVRIELHLNPLINE-GMTGCGLWIINPPYTFPSEIKLVLETLTTYFNPGS-SSYMIES--GS
3PROSPECT22oo3A0.3890.9464.634threading_3--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKD----KTEEYKEGINPVWLDENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREIS-SKSVRIELHLNPLINE-GMTGCGLWIINPPYTFPSEIKLVLETLTTYFNPGS-SSYMIESGSKC
4PPA-I2oo3A0.3890.9467.238threading_4--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKD----KTEEYKEGINPVWLRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREIS-SKSVRIELHLNPL-INEGMTGCGLWIINPPYTFPSEIKLVLETLTTYFNPG-SSSYMIESGSKL
5HHPRED-l2oo3_A0.3900.94312.343threading_5--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKDK----TEEYKEGINPVWLRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS-KSVRIELHLNPLIN-EGMTGCGLWIINPPYTFPSEIKLVLETLTTYFNPGSSS-YMIESGSK-
6HHPRED-g2oo3_A0.3890.94610.860threading_6--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKDK----TEEYKEGINPVWLRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS-KSVRIELHLNPLIN-EGMTGCGLWIINPPYTFPSEIKLVLETLTTYFNPGSSS-YMIESGSKL
7SP32oo3a0.3900.9437.485threading_7--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKD----KTEEYKEGINPVWLDENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS-KSVRIELHLNPLINE-GMTGCGLWIINPPYTFPSEIKLVLETLTTYFNPGS-SSYMIES-GSK
8SAM-T992oo3A0.3910.9508.672threading_8--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKDK----TEEYKEGINPVWLRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREI-SSKSVRIELHLNPLI-NEGMTGCGLWIINPPYTFPSEIKLVLETLTTYFNPGSSSYMIESGSKLC
9MUSTER2oo3A10.4450.5211.665threading_9--------HAGNFADVIKHITLTRLLAYLTHKDKPLFYLETHSGRGIYDLKD----KTEEYKEGINPVWLRENLPSLFLEYISVIKQINLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKR--------------------------------------------------------------------------------------------------------------------------
10SPARKS2pwya0.1510.7820.842threading_10LVFPKEGGVFHHHKGSVPH-------EALLEAGPG-GVVRTHLGEELSVHRPT--------LEEYLLHMKRSATPTYPKDASAMVTLLDLAPGMRVLTGSTLFLARAVGEKGLVESYEARPHHLAQAERNVRAVENVRFHLGKLEEA----ELEEAAYDGVALDLM-----EPWKVLEKAALALK--PDRFLVAYLP--NITQVLELVRAAEAHPWREWEVRLPVAHPRFQQVGHTAFLVALRRWKGS--------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.962 to 2oo3A
SCOP code=c.66.1.59
TM-score=0.964 to 2oo3A
SCOP code=c.66.1.59
TM-score=0.960 to 2oo3A
SCOP code=c.66.1.59
TM-score=0.966 to 2oo3A
SCOP code=c.66.1.59
TM-score=0.966 to 2oo3A
SCOP code=c.66.1.59