Template-based Modeling Results for YHIN_ECOLI

Submitted Primary Sequence

>Length 400
MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLDLNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLDLNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSS
CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHEEECCCCCCEEECCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEECCEEEEECCCEEEECCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEECCEEEEECCEECCHHHHHCCCCCCCEEEEEEEECCCCEEECCCEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCEEECCCCCHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLDLNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSS
5441000000000000000010031212000013244113100101212000011212101012212300220022023210020025221102222313211332032002100210340402011202021012233101021322101011000011121111211111002002312020020100002020232112213211110010000122221122311002300200000100111332220000001313131002212322333203200111003100210131031331213302231021002002302020212311210000110010221113212133031000001000020201000010000001000120122335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLDLNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSS
1	MUSTER	2gqfA	0.551	0.975	3.071	threading_1	SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI-LSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFISLVAEQGITYHEKELGQLFC-DEGAEQIVELKSECDKYGAKILLRSEVSQVERIQNRFVLQVNSTQWQCKNLIVATGGLS-PGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRETD-KFLTALSGISLPVTITALCGKSFYNQLLFTHRGISGPAVLQISNYWQPTESVEIDLLPNHNVEEEINQAKQSSP-KQLKTILVRLLPKKLVELWIEQGIVQDEVIANISKVRVKNLVDFIHHWEFTPNGTEGYRTAEVT-GGVDTKVISSKTE-SNQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSISRQ---
2	SPARKS	3v76a	0.529	0.950	6.679	threading_2	---QDVVIIGAGAAG--CAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRLAEKEA---GVQLRLETSIGEVERTASGFRVTTSAGTVDAASLVVASGGKSIPK-GATGLAYRIAEQFGLPVVETRPALVPLTLDQAQLAKLGALAGVAADAEARFG-KAAFREAVLITHRGLSGPAILQISSYWREGEEIVLRL-PDIDIASILK-GRRANGRQAVQTALADILPRRLAQFFADEAKLTG-RLADLSDKTIDALASSIQVWAVKPAGSEGYRTAEVTLGGVDTRALDSRT-QAKEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQDV------
3	PROSPECT2	3v76A	0.524	0.950	5.685	threading_3	---QDVVIIGAGAAGCAIE--AGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRLA---EKEAGVQLRLETSIGEVERTASGFRVTTSAGTVDAASLVVASGGKSIPK-GATGLAYRIAEQFGLPVVETRPALVPLTLDQAQLAKLGALAGVAADAEARF-GKAAFREAVLITHRGLSGPAILQISSYWREGEEIVLRL-PDIDIASIL-KGRRANGRQAVQTALADILPRRLAQFFADEAKL-TGRLADLSDKTIDALASSIQVWAVKPAGSEGYRTAEVTLGGVDTRALDSRTQ-AKEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQDV------
4	PPA-I	2i0zA	0.305	0.993	4.116	threading_4	-MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPEIVKHIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGKAVILQTGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTITELFPTEVPILSNEPFIRD-RSLQGLALRDINLSVLNASHKMDMLFTHFGLSGPAALRCSQFVVNTIQMSIDALPEENLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLEKNEIGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAK-
5	HHPRED-l	3v76_A	0.530	0.948	3.201	threading_5	---QDVVIIGAGAAG--CAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIR---AE-KEAGVQLRLETSIGEVERTASGFRVTTSAGTVDAASLVVASGGKSIPK-GATGLAYRIAEQFGLPVVETRPALVPLTLDQAQLAKLGALAGVAADAEARF-GKAAFREAVLITHRGLSGPAILQISSYWREGEEIVLRL-PDIDIASILKG-RRANGRQAVQTALADILPRRLAQFFADEAKLTGR-LADLSDKTIDALASSIQVWAVKPAGSEGYRTAEVTLGGVDTRALDSRT-QAKEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQDV------
6	HHPRED-g	3v76_A	0.530	0.948	5.523	threading_6	---QDVVIIGAGAAG--CAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIR---AE-KEAGVQLRLETSIGEVERTASGFRVTTSAGTVDAASLVVASGGKSIPK-GATGLAYRIAEQFGLPVVETRPALVPLTLDQAQLAKLGALAGVAADAEARF-GKAAFREAVLITHRGLSGPAILQISSYWREGEEIVLRL-PDIDIASILKG-RRANGRQAVQTALADILPRRLAQFFADEAKLTGR-LADLSDKTIDALASSIQVWAVKPAGSEGYRTAEVTLGGVDTRALDSRT-QAKEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQDV------
7	SP3	3v76a	0.529	0.950	7.392	threading_7	---QDVVIIGAGAAG--CAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRLAEKEA---GVQLRLETSIGEVERTASGFRVTTSAGTVDAASLVVASGGKSIPK-GATGLAYRIAEQFGLPVVETRPALVPLTLDQAQLAKLGALAGVAADAEARF-GKAAFREAVLITHRGLSGPAILQISSYWREGEEIVLRL-PDIDIASILK-GRRANGRQAVQTALADILPRRLAQFFADEAKL-TGRLADLSDKTIDALASSIQVWAVKPAGSEGYRTAEVTLGGVDTRALDSRT-QAKEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQDV------
8	SAM-T99	2i0zA	0.304	0.988	5.970	threading_8	-MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKVILQTGELETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTITELFPTEVPILSNEPFIRSLQGLALRDINLSVLNAI-ISHKMDMLFTHFGLSGPAALRCSQFVTNTIQMSIDALPEENSEQLFQRMLKEDPKKGIKNVLKGYVPERYFLFLLEKNEIDSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGEN---
9	MUSTER	2i0zA	0.310	0.993	3.028	threading_9	M-HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPEIVKHIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGKAVILQTGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTITELFPTEVPILSNEPFIRDLQGLALRDINLSVL-NAIISHKMDMLFTHFGLSGPAALRCSQFVVNTIQMSIDALPEENLFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLEKNEIDSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTGGGVSVKEINPKEMSSKFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAK-
10	SPARKS	2gqfa	0.564	0.975	5.399	threading_10	SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI-LSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVE-LKSECDKYGAKILLRSEVSQVERIQNDFVLQVNSTQWQCKNLIVATGGLS-PGLGATPFGYQIAEQFGIPVIPPRASLVPFTYRETD-KFLTALSGISLPVTITALCGKSFYNQLLFTHRGISGPAVLQISNYWQPTESVEIDLLPNHNVEEEINQAKQSSPK-QLKTILVRLLPKKLVELWIEQGIVQDEVIANISKVRVKNLVDFIHHWEFTPNGTEGYRTAEVT-GGVDTKVISSKT-ESNQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSISRQ---

Predicted Tertiary Structure


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TM-score=0.980 to 2gqfA SCOP code=c.3.1.8	TM-score=0.980 to 2gqfA SCOP code=c.3.1.8	TM-score=0.949 to 2gqfA SCOP code=c.3.1.8	TM-score=0.946 to 2gqfA SCOP code=c.3.1.8	TM-score=0.968 to 2i0zA SCOP code=c.3.1.8