Template-based Modeling Results for YHID_ECOLI

Submitted Primary Sequence

>Length 215
MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSALFMIVSKYGFADVLSLDHVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIWVTAAIGMVIGSGMYELGIYGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSMLDWFKQQKIKTDLVSLQENEDHEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSALFMIVSKYGFADVLSLDHVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIWVTAAIGMVIGSGMYELGIYGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSMLDWFKQQKIKTDLVSLQENEDHEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSALFMIVSKYGFADVLSLDHVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIWVTAAIGMVIGSGMYELGIYGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSMLDWFKQQKIKTDLVSLQENEDHEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS
44021002000000000000011213322110100000000000000002101111222322221111001100000000000000022322200000000000000000000010000000000000001002201221243312010102212121002103434020110102323443201010203322213200310321221210223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSALFMIVSKYGFADVLSLDHVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIWVTAAIGMVIGSGMYELGIYGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSMLDWFKQQKIKTDLVSLQENEDHEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS
1	SPARKS	3h90a	0.096	0.972	1.140	threading_1	VDSLVDIGASLTNLLVVRYSLQPADDNHSFGHKAESLAALAQSMFISGSALFLFLISPTPMTDPGVGVIVTIVALICTIILVSFQVVRRTQSQAVRADMLHYQSDVMAILLALGALFALGIGIYILYSALRMGYEAVQSLLDRA------LPDEERQEIIDIVTSWPSGAHDLRTRQSGPTRFIQIHLEMEDSLPADQVEQAILRRFPGSDVIIH
2	PROSPECT2	1o0wa	0.140	0.898	1.177	threading_2	MNESEREELLFRALCHSSYANEQNQAGRKDVESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDASEEVLAMVSRKMNLGKF-LFLGKGEEKTGGRDRDSILADAFEALLAA--IYLDQGYEKIKELFEQEFEFYIEKIMKGEM--------LFDYKTALQEIVQVPPEYILVRTEKNDGDRIFVVEVRVNGKTIARIAYEKL-----------L
3	HHPRED-l	2ko1_A	0.133	0.349	1.142	threading_3	-------------------------------------------------------------------------------------------------------------------------------------------MTDFLAGIRIVGEDKNTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVKNTDKLTTLMDKLRKVQGVFTVER-
4	HHPRED-g	2ko1_A	0.145	0.353	1.336	threading_4	-------------------------------------------------------------------------------------------------------------------------------------------MTDFLAGIRIVGENGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVKNTDKLTTLMDKLRKVQGVFTVERL
5	PROSPECT2	1rc7A	0.109	0.893	1.127	threading_5	MKLEQLEKKLKSLLEKALT--HVSYSKKEHYETLEFL--GDALVNFFIVDLLVQYSPNKREGFLSPLKFFNLLAQKLELHK---FIRIKRGKINETIIGDVFKALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTI-------LQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTAEELIKLLEE---------S
6	HHPRED-g	2pc6_A	0.127	0.330	1.206	threading_6	-----------------------------------------------------------------------------------------------------------------------------------------------RHIISLLNEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSR-TLVTNPDEIVEQITKQLNKLIEVVKLIDL
7	PROSPECT2	1kkha	0.089	0.940	1.030	threading_7	NINPNNFGDFKYCLCAIKNTLDYLNIEPKTGFKINISSKISSASITIGTIKAVSGFYNKELKDDEIAKLGYMVTDTSTITYKGILEIKNNKFRKIKGEFEEFLAELVNEVAKIENKDEIFKEIDKVIDEALLMTKNHELLKKLN------ISTPKLDRIVDIGNRFGFGAKL------TGAGGGGCVIILVNEEKEKELLKELNK-EDVRIFNCR
8	HHPRED-g	2f1f_A	0.160	0.349	1.005	threading_8	--------------------------------------------------------------------------------------------------------------------------------------------ARRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVDEKVLEQIEKQLHKLVDVLRVSEL
9	HHPRED-g	2jhe_A	0.176	0.316	1.004	threading_9	------------------------------------------------------------------------------------------------------------------------------------------------MRLEVFDRLGLTRELLDLLVLRGIDLRGIEIDPI-G--RIYLNFAELEFESFSSLMAEIRRIAGVTDVRTV
10	MUSTER	3k5pA2	0.130	0.823	0.614	threading_10	------------------------SRDRIN-----VLLLISQTAVEYFKSSGYTNVTHLP-KALDKADLIKAIS------AHIIGIRSRTQLTEIFAAA-LKAARKRGIPVFSTEEAQERIGTEVTRKLVEYSDVVQLPPRPTGTRFMHVHENRPLNSLMNVFSHHHINIASQFLQTDGEVGYLVMEADGVGE-ASDAVLQEIREIPGTIRARLL

Predicted Tertiary Structure


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TM-score=0.730 to 2qfiA SCOP code=d.52.9.1	TM-score=0.764 to 1o0wB SCOP code=a.149.1.1	TM-score=0.524 to 1y7pB SCOP code=c.23.1.7	TM-score=0.524 to 1y7pB SCOP code=c.23.1.7	TM-score=0.698 to 1yykA SCOP code=a.149.1.1