Template-based Modeling Results for YHHQ_ECOLI

Submitted Primary Sequence

>Length 221
MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSILGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSILGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSILGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS
54322322221000000000000000010001100210111010000000000000000030100210110000000000000000000121122311100120110001000000001000100000001113322210001000000010000000000000211310203100100001000100000000000000001001220233232312334
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSILGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS
1	PROSPECT2	3kb9A	0.059	1.000	1.237	threading_1	KRLMPADKVEEYADLQAIADYSAWFFVWDDRHDRDIVHGRAGAWRRLRGTLVAGFADSVRRLFLPATWNARFARHFHTVIEAYDREFHNRTRGIVPGVEEYDAVRKHPAYRRAALLSQEFAAWYNDLCSLPKEIAGDEVHAIGEVRRRVEECITEFERDALRFADELADGTVRGKELSGAVRANVGNMRNWFSSVYWFHHESGRYMVDSWDDRSTPPYVNN
2	PPA-I	1pw4A2	0.085	0.905	1.188	threading_2	QYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELA----------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-------WDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP----
3	PROSPECT2	1r2fA	0.079	0.914	1.231	threading_3	ISTLSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQIILAHYVSDEPLKKKIASVFLTADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYALYAETGWVNDVKAFLC-------------------YNANKALMNLGYEALFPPEMAD
4	PROSPECT2	1h0oa	0.080	0.959	1.219	threading_4	NPSLKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMMYSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWA--------LRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREII-TNAVRIEQEFLTCTLMKQYIEFVADRLMLELGFNKIFRVE
5	PROSPECT2	1kgna	0.076	0.955	1.210	threading_5	SNEMTPQEQLATMRVFTGLTLLDTIQGTVGAISLLPDAETMHEEAVYTNIAFMSYSNIFMTLASTPQINEAFRWSEENENLQRKAKIIMSYYNGDDPLKKKVASTLLLFYSGFYLPMYLSSRAKLTNTAD----------IIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTLYENEIEYTEDIYDVKRFLRYNANKALNNLGYEGLFPTDETS
6	PROSPECT2	1t33A	0.086	0.896	1.201	threading_6	MNIPTTTTKGEQAKSQLIAAALAQFGEYGLH----------ATTRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSA--YQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLA-----------FRLGKETILLRTGWPQFDEEKAEL
7	MUSTER	1pw4A2	0.100	0.905	0.916	threading_7	QYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDWAYFLYEYAGIPGTLLCGWMSDKVGNRGATGVFFMTLVTIATIVYWMNPAG-----NPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG------------WDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP----
8	SPARKS	3mvpa	0.067	0.882	0.971	threading_8	KPKQERSIEKRNKILQVAKDLFSDKYFNVTTNEIAKKADV--SVGTLYAAS---KEDILTALL-KRYNDFFLT----------------TIFADINSQDSLDRFKK-NPKEWLNVLINQLLAAE-DKIFHAQIELAYAIPQAKALLEEHNNNLKNLTYKCLLYYSDQAANPSFKTLSLVVFDFISALVDELLYHEHTQEEAHQIKKTGIDSL--DLIIKSY
9	PROSPECT2	1pw4A2	0.101	0.896	1.197	threading_9	TAVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGL-------HALELAPKK---AAGTAAGFTGLFGYLGGSVAA-----------SAIVGYTVDDGGFMVMIGGSIL--AVILLIVVMIGEKRRHEQLLQELVP
10	PPA-I	1pw4A1	0.117	0.887	0.978	threading_10	LPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALQGFSRGFALSGISIAYGFSKFIMGSVSDRSPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHW-----WSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAA------------LYMPAFCAILVALFAFAMM--------RDTPQSCGLPPI

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.931 to 1pw4A SCOP code=f.38.1.1	TM-score=0.598 to 1hm7B SCOP code=a.128.1.4	TM-score=0.909 to 1pw4A SCOP code=f.38.1.1	TM-score=0.729 to 1uzrB SCOP code=a.25.1.2	TM-score=0.786 to 1h0nA SCOP code=a.25.1.2