Template-based Modeling Results for YHHN_ECOLI

Submitted Primary Sequence

>Length 208
MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL
3210000000000000011231220111001000000000000202222110000000000000010021023321010000000000000000012122211210000010000000011214133120000000000000000001211122211000000000000000000001202230300000000000000000000122
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL
1	SPARKS	1is2a2	0.047	0.413	1.158	threading_1	--------------------------------------------------------------------------------------------------------------------------VDINSLEGLTEAYKLRAARLVEIAAKNLQTHVSDLVRASEAHCHYVVVKVFSDKLPKIQDKAVQAVLRNLCLLYSLYGISKGGDFL
2	PROSPECT2	1r2fA	0.130	1.000	1.247	threading_2	IDLEVWNRLTSSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNADAITPHEEAVLSNISFMSYSSIFSTLCQTKEVDAAYAWSEPPLQRKAQIILAHYVSDEPLKKKIASVFLWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIQIALQKLSAIEREELKLFALDLLMELYYTEALYAETGWVNDVKAFLCYNANKALILAALSP
3	PPA-I	2vpyC	0.163	0.976	1.330	threading_3	FVLVGLAGGVALLAALLHLKGDAEARRYTLYALMLIALDLFILWAESPASPIWWGAWGLGLGFLTGGLLYLGKGSLAWALLVFSLVALSYPGLALAVNLNRPLWLFPLTALVLALGLAALLKSPWALFPLRVLAGASLLLALLYP-----LTLPPEARGHLLEEAGFWYGLFLLLGLGTFWQERLAPWAGLLAAAGLRALLVLAGQWQ
4	SPARKS	3ipia	0.117	0.990	1.157	threading_4	EEWEEYRYVEAGIKESITLIEDPKKVEHVCHIRPIILLLVSEICSGSYSRSLNAALAVESASLIHDDLLDQGLPEKFGPSGALLCGDYLIAKSIAFISP--YGEKVIQDFGKAGDAEGEVLDLKENDYFKCIYKKTASLFAISASIGAYTGGAEERFSHFGNALGTAYQIVDDILEFLEVVESTSKEEALKKSIDCVKLHVAAAKETL
5	PROSPECT2	3a0oA3	0.067	1.000	1.240	threading_5	PNHCGWAEFYEKSVEPWLERPVMQMYIDCQEVIYAIRHLAIAGRTSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVFPAVRSLSAVLTPACIALQGESDEAGEWLDYTVGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLLKLGYNVRQFAGVTGNGHYQWYFDHIKADALNFDDLVY
6	PPA-I	3mvpA	0.107	0.851	1.227	threading_6	-----------------KNIRKPKQERSIEKRNKILQVAKDLFSDASKEDILTALLKRYNDFFLTTIFADINSQDSLDRFKKNPKEWLNVLINQLLAAED------------KIFHAQIELAYAIPQAKALLEEHNNNLKNLTYKCLLYYSDQAANPSFKTLSLVVFDFISALVDELLYHEHTQEEAHQIKKTGIDSLDLIIKSYL--
7	SPARKS	2zuea	0.102	0.846	1.091	threading_7	FTVDEVIQEAVKRARELIEEKNPEEKAEVAEKVGIGAIRYNLIKYSPDKKIIF------------RWEDVLNFEGESAPYIQYAHARCSSILRKAEEEGIKVDPETLFKNAD---------FTKLSERERELVIMLSKFPRIVEQAGKD--VKPH---------LIAWFANELASLFNKFDHPVEGVREARLLLVMAVEQVLKNALYL
8	PROSPECT2	1t33A	0.120	0.918	1.216	threading_8	MKSQLIAAALAQFGEAALAGQNIAAITYYFGSKEDLYLACAQW-------IADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQ----------EDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDAILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIILHGLTQ
9	PPA-I	1t33A	0.121	0.832	1.173	threading_9	QNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQ-------VIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILPQFDEEKAELIYQTVTCHIDLILHGLTQ----------------------------
10	SPARKS	1fcha	0.169	0.827	1.086	threading_10	EAWQYLGTTQAE--------NE--------QELLAISALRRCLELKPDNQTALMALAVSFTNEQRQACEILPAYASLLSDSLFLEVKELFLAAVRLDPTSID----PDVQCGLGVLFNL-----SGEYDKAVDCFTAALSV-----------RPNDYLLWNKLGATLANGNQSEEAVAAYLQPYIRSRYNLGISCILGAHREAVEHFL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.514 to 1hrbA SCOP code=a.24.4.1	TM-score=0.453 to 2pmsC SCOP code=h.4.19.1	TM-score=0.727 to 2bq1I SCOP code=a.25.1.2	TM-score=0.508 to 1tqgA SCOP code=a.24.10.3	TM-score=0.746 to 1v4jA SCOP code=a.128.1.1