Template-based Modeling Results for YHHJ_ECOLI

Submitted Primary Sequence

>Length 374
MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTPGSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVSLETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPFEIMMAKIWSMGLVVLVVSGLSLVLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAILYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTPGSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVSLETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPFEIMMAKIWSMGLVVLVVSGLSLVLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAILYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTPGSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVSLETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPFEIMMAKIWSMGLVVLVVSGLSLVLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAILYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA
34102100110021021011131100010000000000011112121320200001223131022002102523202021111320120033130100000132032102213322000001012211010010102200201021101313332322220101011222111001000100000000000000000002121110012011121210100002000000000000000000001000102020100000000000000000000000001211110000000000000000000012310130010001000000001000000122010210011000000000000000012012102324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTPGSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVSLETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPFEIMMAKIWSMGLVVLVVSGLSLVLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAILYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA
1	PROSPECT2	1jdha	0.098	0.979	1.622	threading_1	TKLLQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETAVKMLGSPVDSVLFYAITTLLHQEGAKMAVRLAQKMVALLNKTNVKFLAITNQESKLIILASGQALVNIMRTYTYEKLLWTTSRVLKVLKPAIVEAGGMQALGLHLTDP--------SQRLVQNCLWTLRNLSLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAPAICALRHLTSRHQEAEMAQNAVRLHWPLIKATVGLIRNLALCPANHAPLAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLIQRVAAGVLCELAQDKEAAEAIFRMS
2	HHPRED-l	3cni_A	0.119	0.358	3.740	threading_2	-------------------------------------------------QKVAIVREDTGTIAELAEKALG--N-VDIVGSDLKEAEEAVKKEKAPAIIVIPKGFSQSLESGEKARLEIVWYLRGTGLSEAVTGTISSLIESLKVQLASFLLQLLFDPLEIVQHTYLRGSL-FKN-HSPEAI-NVFYSQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	HHPRED-g	3cni_A	0.131	0.348	4.662	threading_3	-------------------------------------------------QKVAIVREDTGTIAELAEKALG----N-VDISDLKEAEEAVKKEKAPAIIVIPKGFSQSLESGEKARLEIVWYLRGTGLSEAVTGTISSLI-ESLKVQLASFLLALFDPLEIVQHTYLRGSLKN---HSPEAI-NVFYSQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	SAM-T99	3cniA	0.156	0.377	1.038	threading_4	-------------------------------------------------QKVAIVREDTGTIAELAEKALGNVDIV---AGDLKEAEEAVKKEKAPAIIVIPKGFSQSLESGEKARLEIVWYLRGTGLSEAVST----------------------------------------------------------------------GTISSLIES---------------LKVQLASFLLNDPKKAQLLFDP-----------------------------------------------------------------------------LEIVQHTYLRGSLFKNHSPE--------------AINVFYSQ-----
5	PROSPECT2	1ejlI	0.083	0.933	1.559	threading_5	VNW-------SVEDIVKGINSNNLESQLQATQAARKLLS-----REKQPPIDNIIRAGL---IPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFIS--------LLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLDAVEQILPTLVRVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNY--TSGGTVEQIVYLVHCGIIEPLMNLLIIQVILDAISNIFQAAKLSIMIEECG
6	HHPRED-l	2p0s_A	0.128	0.313	1.305	threading_6	-----------------------------------------------K--TIAIADRTGE-----YEQLFKENDEFRFVEKTAEEYRK-GAKSGIDAVLEIRQDLE------DPNAVAIYGYKQPASVSNHISRILSDYLSDKKIASPKQILADSKIELSVHTYKWSE-----TSGELASGIS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	PROSPECT2	1gw5a	0.089	0.992	1.553	threading_7	MRGLAVFIKRINKELANIRSLDGYSKKKYVCKLLFIFLLGHDIDFGHMEA-VNLLSSNRYTEKQIGYLFISVLVNSNSELIRLNAIKNDLASGSREMAEAFAGEIPKILVAGDTMRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFSRIVTSASTDLQDYTYYFVPAPWLSVKLLAVRGRLTECLETILNKVQHSNAKNAVLFEAISLIIHHDSE--PNLLVRACNQLGQFTNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYEEVWYRVIQIVINRDDVQGYAAKTVFEALQAPACHENLVKVGGYILGEFG
8	PROSPECT2	1b3ua	0.080	0.997	1.528	threading_8	LNSIKKLSTIALALGVERTRSELLPFLTEVLLALAEQLGTFTTLVGGPEYVHCLLPTVEETVVRDSLRAISHEHSPSDLEAHFVPLVKRLAGGDCGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFALDNVKSEIIPMFSNLASDEQDSVRLLLLPQEDLEALVMPTLRYMVADKFTELQKAVEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCERENVIMSQILPCIKELVSDANQ-HVKSALASVIMGLSPILGKDNTIEHLLPLFLAQIRQLSQSLLPAIVLAGQLGVEFFDEKLNSLCMAWFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPLA
9	PROSPECT2	1ee4a	0.091	0.885	1.520	threading_9	TQQLMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMREN-----------QPEMLQLEAAWALTNIAS-----GTSAQTKVVVDADAVPLFIQLSTDYRDYVLQCNAEPILGLFNSNKPSLIRTATWTLSNLCWSVVSQALPTLAKLIYSM---------DTETLVDACWAISYLSDGPQEAIQAVIDVRIPKR-----LVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVIN----------AGVLPALRLLENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVA---EDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCNRIIEVTLDALENILKMGEADKEAIETYF
10	MUSTER	3g61A1	0.107	0.896	0.763	threading_10	-VSVLTMFRYAWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMT---------------DSFASVGNVSKNSTNMSEADKRAMFAKLEEEMT----TYAYYY---TGIGAGVLIVAYIQV------SFWCLAAGRQIHKIRQKFFHAIMNQEIGDVHDVGELNTRLTDDVSK--INEGIGDKIGMFFQAMATFFGGFIIGFTRI-GQVLTVFFS-VLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVF---GITFSFTQAMMYFSYAACFRFGAYL-VTQ--QLMT

Predicted Tertiary Structure


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TM-score=0.442 to 1h6gA SCOP code=a.24.9.1	TM-score=0.631 to 1wa5B SCOP code=a.118.1.1	TM-score=0.372 to 2onrA SCOP code=c.94.1.1	TM-score=0.369 to 1a55A SCOP code=c.94.1.1	TM-score=0.357 to 2gjvA SCOP code=d.323.1.2