Template-based Modeling Results for YHGN_ECOLI

Submitted Primary Sequence

>Length 197
MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVRELLIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAGEEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFLRLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVRELLIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAGEEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFLRLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVRELLIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAGEEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFLRLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG
34200100010000000000000001003323332130000200000000000000002100100103120010000000000002101322223222232233211110001110011000000001322223202000000000000000010021003100330020012000000000001001200231034
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVRELLIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAGEEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFLRLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG
1	PROSPECT2	1pw4A2	0.096	0.949	1.131	threading_1	WYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK----SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNP------TVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVEQLLQELVP
2	HHPRED-g	2cfq_A	0.102	0.949	1.458	threading_2	LFFFFYF--FIMGAYFPF--FPIWLHDINHISKSSRRSNFGRARMFGCVGWALGASIVGIMFTINNQF--VFWLGSGCALILAVLLFFAKAPSSATVANAVANHSKLWFLSLYVIGVYDVFDQQFANFTSFFATQTRFGYVTTMGELLNASIMFFAPLIINRIGGKNALLL----AGTIMSVRIIGLLVYITSQFEV
3	PROSPECT2	1oyzA	0.081	1.000	1.118	threading_3	DDELFISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFDNVFNILVRATAIESTAQRCKKNPIYSPKIVEQSQITVRRATAFAISVIATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKDDIIEAAGELGDKTLLPVLDEIITSAIDKLKRS
4	PROSPECT2	2qk1A	0.099	0.924	1.087	threading_4	SVEALEEFWDSVLSQTKSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLDYVSLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYDPLASSGRNEDLKDILEHKHKTPQIRE-------CTQLFNASKEEKDGYSTLQRYLKDEVV--------PIVIQIVNDTQPAIRTIGFESFAILIKINLKRKKIEETVKT
5	PROSPECT2	1wa5C1	0.098	0.985	1.082	threading_5	METVAKFLANLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALFFKNFIKRKNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDRWPTLLSDLASRLSNDDMVTNKGVL---TVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLNLLKTVDEQITANEKASLNILFDVLLVLIKLYYDFQVGMGIFLE
6	PROSPECT2	2of3A	0.101	0.909	1.082	threading_6	AELLLDEHISQLQTLLGNQAKVSLMSQLFHKDFKQHLAALDSLVRLARSLLSNSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQ------------------EEVSAFVPYLLLKTGEAKDNMRTSVRDIVNVLSDVVGPLKMTPMLLDALKSECLLVIEYYIAINVLVACFKFEGDQMWKAAGR
7	MUSTER	4a2nB	0.109	0.888	0.864	threading_7	MENLWKICFIVMFIIWVFVRKVYGTRAMKNKSKKKVRPNFEKSLVFLNFIGMVFLPLTAVFLDSFNINLPDSIRLFALIVTFLNIGLFTGNNWSAILEIKDGHKLVK-IYKNPMY--AHLWLWVITQGIILSNWVVLIFGIVAWAILYFIRVPKEEELLIEEFGDEYIEYMGKTGRLF-------------------
8	SPARKS	2hyja	0.123	0.782	0.839	threading_8	------------------------------AEAQATRGRILGRAAEIASEEGLDGITIGRLAEELEMSKSGVHFGTKETLQISTLDKAFVDFWHRVVEPALAEPPGLRRL-------RAVCANSVGYLEEPLLPGGCLLTAALSEYD------GRPGRVRDAVAEVWSRWREQLRADLTAAVDVEQALFEIVAAGLA
9	PROSPECT2	2bkuB2	0.108	0.985	1.077	threading_9	QELQSNILTVLAAVIRDMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLPVSITAVGFIADISMMNVLAQMISNPNARREAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAEDPQLYS---EDATSRAAVGLIGDIAAMWVIDYIKRTQKRQLSL
10	PPA-I	1pw4A2	0.138	0.954	0.985	threading_10	WYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFR----GNRGATGVFFMTLVTIATIVYWMNPAGNPTVD-----MICMIVIGFLIYGPVMLIGLHALELAPKKAAAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQL

Predicted Tertiary Structure


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TM-score=0.912 to 1pw4A SCOP code=f.38.1.1	TM-score=0.865 to 1pw4A SCOP code=f.38.1.1	TM-score=0.526 to 1pv6A SCOP code=f.38.1.2	TM-score=0.798 to 1oyzA SCOP code=a.118.1.16	TM-score=0.630 to 1wa5C SCOP code=a.118.1.1